RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 SFTPCP11686 197 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 ADRA2CP18825 462 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 RAB6AP20340 208 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 DNASE1L1P49184 302 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 PSMA6P60900 246 aaKnown RBP9.4□□□□□ -0.9
CDCA3-201ENST00000229265 FMODQ06828 376 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 SNTB2Q13425 540 aaKnown RBP9.4□□□□□ -0.9
CDCA3-201ENST00000229265 BCL2L15Q5TBC7 163 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 OR7E24Q6IFN5 339 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 RAB12Q6IQ22 244 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 ZNF529Q6P280 563 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 FCRLAQ7L513 359 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 CMTM4Q8IZR5 234 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 OR4M2Q8NGB6 313 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 OR5M1Q8NGP8 315 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 OR5H6Q8NGV6 325 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 SORCS2Q96PQ0 1159 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 GFI1Q99684 422 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 HES7Q9BYE0 225 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 PBOV1Q9GZY1 135 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 HDHD2Q9H0R4 259 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 NEK6Q9HC98 313 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 MOV10Q9HCE1 1003 aaKnown RBP9.4□□□□□ -0.9
CDCA3-201ENST00000229265 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 ANKRD10Q9NXR5 420 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 EMC3Q9P0I2 261 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 GHRLQ9UBU3 117 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 ATPIF1Q9UII2 106 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 RBMX2Q9Y388 322 aaKnown RBP9.4□□□□□ -0.9
CDCA3-201ENST00000229265 EMC9Q9Y3B6 208 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 LHFPL6Q9Y693 200 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 EML6Q6ZMW3 1958 aa9.4□□□□□ -0.9
CDCA3-201ENST00000229265 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 A0A1B0GVI7 797 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 A0A1W2PPL8 197 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SMIM30A4D0T7 59 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 OR5H15A6NDH6 313 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF716A6NP11 495 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF724A8MTY0 619 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF814B7Z6K7 855 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 RPL36A-HNRNPH2H7BZ11 118 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ACOT7O00154 380 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SMAD9O15198 467 aaKnown RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 MTRF1O75570 445 aaKnown RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 GLSO94925 669 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 CLDN1O95832 211 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 GPANK1O95872 356 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 TTRP02766 147 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 CPN1P15169 458 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 POU3F2P20265 443 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ITGA3P26006 1051 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 GDF1P27539 372 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 OTX1P32242 354 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 KIR2DL3P43628 341 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SOX2P48431 317 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 CLDN20P56880 219 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 PMP22Q01453 160 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 DBPQ10586 325 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 MFAP5Q13361 173 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SLC10A1Q14973 349 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 OR1C1Q15619 314 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 RAB11BQ15907 218 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 C2orf76Q3KRA6 126 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SLC36A2Q495M3 483 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 LINC00696Q6ZRV3 163 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 Q6ZS92 163 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 DOK3Q7L591 496 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 DPPA2Q7Z7J5 298 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 LUZP2Q86TE4 346 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 AKAP14Q86UN6 197 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 LYPD6Q86Y78 171 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ZFP62Q8NB50 900 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 TMEM178AQ8NBL3 297 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 OR13C3Q8NGS6 347 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 YIPF5Q969M3 257 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 TRIM63Q969Q1 353 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 SPTSSAQ969W0 71 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 PHF21AQ96BD5 680 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 MED30Q96HR3 178 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 TTTY10Q9BZA0 68 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 ERRFI1Q9UJM3 462 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-201ENST00000229265 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 CACNG2Q9Y698 323 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 EXPH5Q8NEV8 1989 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 NAV2Q8IVL1 2488 aa9.39□□□□□ -0.91
CDCA3-201ENST00000229265 METTL21EPA6NDL7 271 aa9.38□□□□□ -0.91
CDCA3-201ENST00000229265 EIF1AYO14602 144 aaKnown RBP9.38□□□□□ -0.91
CDCA3-201ENST00000229265 TNFSF11O14788 317 aa9.38□□□□□ -0.91
CDCA3-201ENST00000229265 SYT7O43581 403 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms