RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 AKAP14Q86UN6 197 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 IZUMO1Q8IYV9 350 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 OR1M1Q8NGA1 313 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 CREB3L1Q96BA8 519 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF775Q96BV0 537 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 BCO1Q9HAY6 547 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 GPR35Q9HC97 309 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 PARPBPQ9NWS1 579 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF319Q9P2F9 582 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 PTPRBP23467 1997 aa12.58□□□□□ -0.4
RTFDC1-201ENST00000023939 CTAG2O75638 210 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 KRT33AO76009 404 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 GABRA1P14867 456 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 CRYGSP22914 178 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 BTCP35070 178 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 NOVA1P51513 510 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 BTG1P62324 171 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SPOCK1Q08629 439 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SCRN3Q0VDG4 424 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PGAP1Q75T13 922 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SIAH3Q8IW03 269 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 UBE2J2Q8N2K1 259 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 HPS1Q92902 700 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SPTSSAQ969W0 71 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SORCS2Q96PQ0 1159 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 FOXB1Q99853 325 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ZDHHC11Q9H8X9 412 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 GPR84Q9NQS5 396 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 NLKQ9UBE8 527 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 NOSIPQ9Y314 301 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 TMEM272A0A1B0GTI8 110 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 CIB4A0PJX0 185 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 A6NJ64 397 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PROB1E7EW31 1015 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 RPL36A-HNRNPH2H7BZ11 118 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 TFECO14948 347 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ORC5O43913 435 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ECDO95905 644 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 CPN1P15169 458 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 WT1P19544 449 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 RAB3AP20336 220 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 HLA-DMAP28067 261 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 GDNFP39905 211 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PCBD1P61457 104 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 CD300CQ08708 224 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 PLA2G7Q13093 441 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 FAM57BQ71RH2 274 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ABHD12BQ7Z5M8 362 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 ADGRE4PQ86SQ3 457 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 LRRC18Q8N456 261 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 OR14K1Q8NGZ2 314 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 FCAMRQ8WWV6 532 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 SLCO5A1Q9H2Y9 848 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 METTL17Q9H7H0 456 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 COPZ2Q9P299 210 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 FBLN5Q9UBX5 448 aa12.57□□□□□ -0.4
RTFDC1-201ENST00000023939 WDFY3Q8IZQ1 3526 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 EP300Q09472 2414 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 DCDC2BA2VCK2 349 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 HMX3A6NHT5 357 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SGCEO43556 437 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SYNGR3O43761 229 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 MRPL33O75394 65 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 ALX3O95076 343 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC2A1P11166 492 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 ARSBP15848 533 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF20P17024 532 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 RAB6AP20340 208 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 EFNB2P52799 333 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 AP3S2P59780 193 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 GALK2Q01415 458 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SRYQ05066 204 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SRSF6Q13247 344 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 CEACAM16Q2WEN9 425 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 RSBN1Q5VWQ0 802 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 DRAM2Q6UX65 266 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 ZNF627Q7L945 461 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 KRT74Q7RTS7 529 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 JAGN1Q8N5M9 183 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 OR52I2Q8NH67 350 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 UPRTQ96BW1 309 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 C10orf35Q96D05 121 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
RTFDC1-201ENST00000023939 DLL3Q9NYJ7 618 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms