RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 OR51F2Q8NH61 342 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 THRSPQ92748 146 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 C8orf44Q96CB5 159 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 NMES1Q9C002 83 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 GHRLQ9UBU3 117 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 MBTPS2O43462 519 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 CD2P06729 351 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 IFI6P09912 130 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 CD37P11049 281 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 RPS21P63220 83 aaKnown RBP18.34■□□□□ 0.53
PMS1-222ENST00000639501 UNC119Q13432 240 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 SMCO1Q147U7 214 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 PHF19Q5T6S3 580 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 DHRS11Q6UWP2 260 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 OR13C3Q8NGS6 347 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 SMIM8Q96KF7 97 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 EGLN1Q9GZT9 426 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 SEBOXQ9HB31 216 aaPredicted RBP18.34■□□□□ 0.53
PMS1-222ENST00000639501 MIOXQ9UGB7 285 aa18.34■□□□□ 0.53
PMS1-222ENST00000639501 RPH3AQ9Y2J0 694 aaPredicted RBP18.34■□□□□ 0.53
PMS1-222ENST00000639501 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
PMS1-222ENST00000639501 FAM157AC9JC47 383 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 LRP3O75074 770 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 S100A8P05109 93 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 PNMTP11086 282 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 GNB3P16520 340 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 NME2P22392 152 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 CPT2P23786 658 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 MPZP25189 248 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 GDI1P31150 447 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 CD80P33681 288 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 SKP2Q13309 424 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 PDGFRLQ15198 375 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 LYPD6Q86Y78 171 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 OR2I1PQ8NGU4 316 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 SCARF2Q96GP6 870 aaPredicted RBP18.33■□□□□ 0.53
PMS1-222ENST00000639501 NECAB3Q96P71 396 aaPredicted RBP18.33■□□□□ 0.53
PMS1-222ENST00000639501 ARID1AO14497 2285 aa18.33■□□□□ 0.53
PMS1-222ENST00000639501 S100A9P06702 114 aaKnown RBP18.33■□□□□ 0.52
PMS1-222ENST00000639501 FNDC7Q5VTL7 733 aa18.33■□□□□ 0.52
PMS1-222ENST00000639501 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
PMS1-222ENST00000639501 TAF8Q7Z7C8 310 aa18.33■□□□□ 0.52
PMS1-222ENST00000639501 C12orf76Q8N812 135 aaPredicted RBP18.33■□□□□ 0.52
PMS1-222ENST00000639501 SMCO4Q9NRQ5 59 aa18.33■□□□□ 0.52
PMS1-222ENST00000639501 A0A0A6YYH2 397 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 LOC107986453A0A1B0GWG9 222 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 A6NJ64 397 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 C1orf196B1AJZ1 125 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 MPZL1O95297 269 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 SERPINA5P05154 406 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 DNASE1L1P49184 302 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 BTG2P78543 158 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 FABP9Q0Z7S8 132 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 GPM6BQ13491 265 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 SLC9A3R2Q15599 337 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 SLC18B1Q6NT16 456 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 FAHD2BQ6P2I3 314 aaPredicted RBP18.32■□□□□ 0.52
PMS1-222ENST00000639501 BAHD1Q8TBE0 780 aaPredicted RBP18.32■□□□□ 0.52
PMS1-222ENST00000639501 FAHD2AQ96GK7 314 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 ABHD6Q9BV23 337 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 CNTD2Q9H8S5 307 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 PLA2G2EQ9NZK7 142 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 EMC9Q9Y3B6 208 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 SLC16A7O60669 478 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 NDUFS6O75380 124 aaKnown RBP18.32■□□□□ 0.52
PMS1-222ENST00000639501 MED6O75586 246 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 SLC6A9P48067 706 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 INSM1Q01101 510 aaPredicted RBP18.32■□□□□ 0.52
PMS1-222ENST00000639501 TMEM230Q96A57 120 aa18.32■□□□□ 0.52
PMS1-222ENST00000639501 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 SOX1O00570 391 aaPredicted RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 SSX5O60225 188 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 CD5P06127 495 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 S100A6P06703 90 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 CTLA4P16410 223 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 PI3P19957 117 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 C5AR1P21730 350 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 GPR3P46089 330 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 RPL7L1Q6DKI1 246 aaKnown RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 PTCRAQ6ISU1 281 aaPredicted RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 ZNF600Q6ZNG1 722 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 FAM160A2Q8N612 972 aaPredicted RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 C15orf54Q8N8G6 183 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 ISOC2Q96AB3 205 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 AKR1E2Q96JD6 320 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 LOC390937A0A1W2PQ73 354 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 KAT7O95251 611 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 FCGR3AP08637 254 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 MAOAP21397 527 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 CX3CR1P49238 355 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 RIDAP52758 137 aaKnown RBP18.31■□□□□ 0.52
PMS1-222ENST00000639501 ROM1Q03395 351 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 C1orf100Q5SVJ3 147 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 RSC1A1Q92681 617 aa18.31■□□□□ 0.52
PMS1-222ENST00000639501 TWSG1Q9GZX9 223 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms