RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 IGLV3-21P80748 117 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CDK16Q00536 496 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 REEP5Q00765 189 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CUL1Q13616 776 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PRPSAP1Q14558 356 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PDK3Q15120 406 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 RAB35Q15286 201 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TMED2Q15363 201 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 UBE2V2Q15819 145 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 KLHL38Q2WGJ6 581 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MAJINQ3KP22 176 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC25A35Q3KQZ1 300 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SFT2D3Q587I9 215 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ANKRD22Q5VYY1 191 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TTC23Q5W5X9 447 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 REP15Q6BDI9 236 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF470Q6ECI4 717 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PYHIN1Q6K0P9 492 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 APOOLQ6UXV4 268 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ADAMTSL5Q6ZMM2 481 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 STAC2Q6ZMT1 411 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MBOAT1Q6ZNC8 495 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TAS2R42Q7RTR8 314 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 DPY19L4Q7Z388 723 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CEACAM19Q7Z692 300 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC26A11Q86WA9 606 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF130Q86XS8 419 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC13A5Q86YT5 568 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CCDC50Q8IVM0 306 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 LRRC25Q8N386 305 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF491Q8N8L2 437 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PRELID2Q8N945 189 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ANKFN1Q8N957 763 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 Q8NBF4 154 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MFSD9Q8NBP5 474 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 OR2M7Q8NG81 312 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 OR51Q1Q8NH59 317 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TRMT10AQ8TBZ6 339 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 FNDC8Q8TC99 324 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 NT5CQ8TCD5 201 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF138Q8WVD3 245 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 DNAJA3Q96EY1 480 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 C11orf24Q96F05 449 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PANX2Q96RD6 677 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CCT7Q99832 543 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 EBNA1BP2Q99848 306 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 UTP23Q9BRU9 249 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TTYH2Q9BSA4 534 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MCRIP2Q9BUT9 160 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TSSK1BQ9BXA7 367 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TTTY12Q9BZ98 90 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 UCK2Q9BZX2 261 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 IL22Q9GZX6 179 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 VCX2Q9H322 139 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 TUBB1Q9H4B7 451 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MEAF6Q9HAF1 191 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ADGRL4Q9HBW9 690 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PROK2Q9HC23 129 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF446Q9NWS9 450 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 STMN3Q9NZ72 180 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 NUDT4Q9NZJ9 180 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SPRR3Q9UBC9 169 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 MLXQ9UH92 298 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PCYOX1Q9UHG3 505 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PACSIN2Q9UNF0 486 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PDE10AQ9Y233 779 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 KLF13Q9Y2Y9 288 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 NAALAD2Q9Y3Q0 740 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 WDR45Q9Y484 360 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 SPACA6W5XKT8 324 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 CHD3Q12873 2000 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
SMARCB1-208ENST00000634926 A0A096LNT2 108 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 TEX48A0A1B0GUV7 120 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 A0A1W2PNV4 684 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF860A6NHJ4 632 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 FOXI3A8MTJ6 420 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 KRTAP16-1A8MUX0 517 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 A8MXK9 166 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8KD6RF30 607 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C11orf98E9PRG8 122 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8TH3BQL2 631 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CASKO14936 926 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PPIHO43447 177 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CHST10O43529 356 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 TRIM3O75382 744 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 STX11O75558 287 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 VAPBO95292 243 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 IGHV3-9P01782 118 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C1QAP02745 245 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 STATHP02808 62 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 IGF1P05019 195 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 TPM3P06753 285 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C8GP07360 202 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ANXA5P08758 320 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC35G6P0C7Q6 338 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CCL3P10147 92 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MLNP12872 115 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CD99P14209 185 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms