RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GUCA1AP43080 201 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 PAX2Q02962 417 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 SLC3A1Q07837 685 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF154Q13106 437 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 KRTAP27-1Q3LI81 207 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 HACD2Q6Y1H2 254 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 NAA40Q86UY6 237 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 LRRC28Q86X40 367 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 C19orf18Q8NEA5 215 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 NANPQ8TBE9 248 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 FANK1Q8TC84 345 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 ST7LQ8TDW4 575 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 GCDHQ92947 438 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 MEGF10Q96KG7 1140 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 SAMD8Q96LT4 415 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 DIRC2Q96SL1 478 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 HOPXQ9BPY8 73 aaPredicted RBP9.59□□□□□ -0.87
CPNE3-210ENST00000621245 SUCNR1Q9BXA5 334 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 ANKRD19PQ9H560 264 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 IL19Q9UHD0 177 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 PPP1R3CQ9UQK1 317 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 TMEM5Q9Y2B1 443 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 INSIG2Q9Y5U4 225 aa9.59□□□□□ -0.87
CPNE3-210ENST00000621245 MDFIC2A0A1B0GVS7 189 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 DNAJC9-AS1A6NH13 148 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 A8MXK9 166 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 FOXH1O75593 365 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 TXNDC12O95881 172 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 HLA-DPB1P04440 258 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 CD80P33681 288 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 CENPAP49450 140 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 LSM6P62312 80 aaKnown RBP9.58□□□□□ -0.88
CPNE3-210ENST00000621245 KCNMB1Q16558 191 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 TMEM155Q4W5P6 130 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 ZMAT1Q5H9K5 638 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 GLYATQ6IB77 296 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 LEG1Q6P5S2 330 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 LYPD4Q6UWN0 246 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 UNQ6126/PRO20091Q6UXV3 157 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 ZER1Q7Z7L7 766 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 MOGAT3Q86VF5 341 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 CYP4Z1Q86W10 505 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 C1orf174Q8IYL3 243 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 OR6V1Q8N148 313 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 SLC26A10Q8NG04 563 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 ZNRF4Q8WWF5 429 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 ERMAPQ96PL5 475 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-210ENST00000621245 NMNAT3Q96T66 252 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 RBM4Q9BWF3 364 aaKnown RBP9.58□□□□□ -0.88
CPNE3-210ENST00000621245 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 PNRC2Q9NPJ4 139 aaKnown RBP9.58□□□□□ -0.88
CPNE3-210ENST00000621245 DCAF13Q9NV06 445 aaKnown RBP9.58□□□□□ -0.88
CPNE3-210ENST00000621245 B9D1Q9UPM9 204 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 AP3M1Q9Y2T2 418 aa9.58□□□□□ -0.88
CPNE3-210ENST00000621245 PPIAL4EA0A075B759 164 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 PPIAL4CA0A0B4J2A2 164 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 OR6C68A6NDL8 312 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 PPIAL4DF5H284 164 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 AHCYL1O43865 530 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 PPIAL4FP0DN26 164 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 RAC2P15153 192 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 HIST1H1CP16403 213 aaKnown RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 RHCEP18577 417 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 TNFSF4P23510 183 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 GATA3P23771 443 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 RPS27P42677 84 aaKnown RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SPIBQ01892 262 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SCGB2A2Q13296 93 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 ARMCX4Q5H9R4 360 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 GPR139Q6DWJ6 353 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SLC18B1Q6NT16 456 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 ARL9Q6T311 187 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 LYPD2Q6UXB3 125 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 FBXW12Q6X9E4 464 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 DPY19L2P2Q6ZN68 376 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 DOK3Q7L591 496 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 ADCK1Q86TW2 530 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SPICQ8N5J4 248 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 C3orf56Q8N813 242 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 ATG16L2Q8NAA4 619 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SDR9C7Q8NEX9 313 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 OR10S1Q8NGN2 331 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 OR4K13Q8NH42 304 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 PTP4A1Q93096 173 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 DACT3Q96B18 629 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 COQ7Q99807 217 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 ELAC2Q9BQ52 826 aaKnown RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 SLC30A2Q9BRI3 323 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 OR52D1Q9H346 318 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 TMEM165Q9HC07 324 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 RPRD1BQ9NQG5 326 aaKnown RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 MRPL22Q9NWU5 206 aaKnown RBP9.57□□□□□ -0.88
CPNE3-210ENST00000621245 RPS6KA6Q9UK32 745 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 POLR1DQ9Y2S0 133 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 PCDHGB1Q9Y5G3 927 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 AUP1Q9Y679 476 aa9.57□□□□□ -0.88
CPNE3-210ENST00000621245 IQCF6A8MYZ5 107 aa9.56□□□□□ -0.88
CPNE3-210ENST00000621245 SPRY1O43609 319 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms