RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PIGKQ92643 395 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SMARCD2Q92925 531 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BHQ93079 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 NTNG2Q96CW9 530 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OTUB2Q96DC9 234 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 MVB12AQ96EY5 273 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PELI1Q96FA3 418 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 AKR1E2Q96JD6 320 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 C4orf36Q96KX1 117 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 MRGPRX4Q96LA9 322 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 C5orf34Q96MH7 638 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 WDR92Q96MX6 357 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 IP6K3Q96PC2 410 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 DERL3Q96Q80 235 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SERINC2Q96SA4 455 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PHB2Q99623 299 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BNQ99877 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BMQ99879 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 WFDC6Q9BQY6 131 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 C16orf70Q9BSU1 422 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 DDA1Q9BW61 102 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 BOCQ9BWV1 1114 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SNHG12Q9BXW3 62 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC5A7Q9GZV3 580 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC35B3Q9H1N7 401 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SRMSQ9H3Y6 488 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 POFUT1Q9H488 388 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 FN3KRPQ9HA64 309 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PLEKHA2Q9HB19 425 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRPV4Q9HBA0 871 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 RAB18Q9NP72 206 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 NOX4Q9NPH5 578 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SIRT3Q9NTG7 399 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAAR2Q9P1P5 351 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRODH2Q9UF12 536 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 STEAP1Q9UHE8 339 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF230Q9UIE0 474 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 KCNK6Q9Y257 313 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 STRAPQ9Y3F4 350 aaKnown RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 FRMPD3Q5JV73 1810 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRBV24-1A0A075B6N3 115 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRBV2A0A0J9YWF9 115 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 hCG_1809904A0A1W2PP81 198 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A1W2PR64 198 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A1W2PRV1 198 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CPED1A4D0V7 1026 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MBLAC1A4D2B0 266 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TLCD2A6NGC4 264 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CDRT15L2A8MXV6 281 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 M0R3H8 397 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 NUDT21O43809 227 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 B3GALT2O43825 422 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 B4GALT2O60909 372 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SOCS5O75159 536 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CTAG2O75638 210 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 GJB3O75712 270 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 KAT7O95251 611 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD160O95971 181 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PMP2P02689 132 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OPN1LWP04000 364 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CSTBP04080 98 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD3DP04234 171 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPN2P04844 631 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 GUSBP08236 651 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SOD3P08294 240 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TACSTD2P09758 323 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DANCRP0C864 163 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 GTF2F2P13984 249 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD38P28907 300 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 AKT2P31751 481 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CCKARP32238 428 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MPIP34949 423 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 THBS4P35443 961 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ACVR1BP36896 505 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 LPAR6P43657 344 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPS10P46783 165 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 GLIPR1P48060 266 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DHPSP49366 369 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DIO1P49895 249 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PDLIM4P50479 330 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 IDH3GP51553 393 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PDX1P52945 283 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MANFP55145 182 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAS2R41P59536 307 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAS2R50P59544 299 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPS20P60866 119 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPS23P62266 143 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPS13P62277 151 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC35A1P78382 337 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MC1RQ01726 317 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 LTBQ06643 244 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TWF1Q12792 350 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLINT1Q14677 625 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ELOCQ15369 112 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ELOBQ15370 118 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 USF2Q15853 346 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 GUK1Q16774 197 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 Q499Y3 187 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 NKAIN1Q4KMZ8 207 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms