RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ROR2Q01974 943 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 RIN1Q13671 783 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 APOFQ13790 326 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 GABRA6Q16445 453 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 C6orf141Q5SZD1 244 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 ZNF627Q7L945 461 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 BOD1Q96IK1 185 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 OR51V1Q9H2C8 321 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 MARCH7Q9H992 704 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 CRLF2Q9HC73 371 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 CA10Q9NS85 328 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 MRPS18AQ9NVS2 196 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 HAO2Q9NYQ3 351 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 TAS2R16Q9NYV7 291 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 H2AFY2Q9P0M6 372 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 UPB1Q9UBR1 384 aa11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 COA3Q9Y2R0 106 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-218ENST00000598907 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 GAAP10253 952 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 LAP3P28838 519 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 MPGP29372 298 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC15A1P46059 708 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 BLVRAP53004 296 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 ADIPOQQ15848 244 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 KCNMB1Q16558 191 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 CEACAM16Q2WEN9 425 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 FBLN7Q53RD9 439 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 ABHD12BQ7Z5M8 362 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 GLB1L2Q8IW92 636 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 OR51L1Q8NGJ5 315 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 UBASH3BQ8TF42 649 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 RFKQ969G6 155 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 NABP1Q96AH0 204 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 OTULINQ96BN8 352 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 ALKBH3Q96Q83 286 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 KCNS3Q9BQ31 491 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 DYNLRB1Q9NP97 96 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF99A8MXY4 864 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF587BE7ETH6 402 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 KRT33AO76009 404 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 TFP02787 698 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 SCG5P05408 212 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 ITGA5P08648 1049 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 GSTT1P30711 240 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 FMO3P31513 532 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 CSNK2BP67870 215 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 MRPS34P82930 218 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 HSF2Q03933 536 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 GLO1Q04760 184 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 NRN1LQ496H8 165 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 KLHL12Q53G59 568 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 KRT80Q6KB66 452 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 C1QL2Q7Z5L3 287 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC26A10Q8NG04 563 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 NSMAFQ92636 917 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 PLK3Q9H4B4 646 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 TMEM38BQ9NVV0 291 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 FKBP14Q9NWM8 211 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 RPL36Q9Y3U8 105 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-218ENST00000598907 SNTNA6NMZ2 147 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 SLC1A7O00341 560 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 WNT9BO14905 357 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 GPANK1O95872 356 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 DBTP11182 482 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 NPR2P20594 1047 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 CDAP32320 146 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 MTNR1AP48039 350 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF84P51523 738 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF91Q05481 1191 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 PCK2Q16822 640 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 TEX30Q5JUR7 227 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 RBM48Q5RL73 367 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 LCN1P1Q5VSP4 162 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 OR7E24Q6IFN5 339 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 KLHL24Q6TFL4 600 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 TIGD4Q8IY51 512 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 ZNF511Q8NB15 262 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 FOXB1Q99853 325 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 NELFAQ9H3P2 528 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 RERGLQ9H628 205 aa11.87□□□□□ -0.51
SHKBP1-218ENST00000598907 POLE4Q9NR33 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms