RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NOP16Q9Y3C1 178 aaKnown RBP14.73□□□□□ -0.05
LIG1-206ENST00000594067 IGHV1OR15-9A0A0B4J2B8 117 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.73□□□□□ -0.05
LIG1-206ENST00000594067 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.73□□□□□ -0.05
LIG1-206ENST00000594067 MEGF11A6BM72 1044 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 WIPF3A6NGB9 483 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 FTCDNL1E5RQL4 147 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 OR7A5Q15622 319 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 LPCAT3Q6P1A2 487 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 PAPD4Q6PIY7 484 aaKnown RBP14.73□□□□□ -0.05
LIG1-206ENST00000594067 ACOT7LQ6ZUV0 252 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 ZNF584Q8IVC4 421 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 OR1S2Q8NGQ3 325 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 ST7LQ8TDW4 575 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 PDCD10Q9BUL8 212 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 MED29Q9NX70 200 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 COMMD9Q9P000 198 aa14.73□□□□□ -0.05
LIG1-206ENST00000594067 A0A1W2PR77 199 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 NPIPA5E9PKD4 350 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 OR2T1O43869 369 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 CD74P04233 296 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 CD37P11049 281 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 FOLR1P15328 257 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 EIF1AXP47813 144 aaKnown RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 ATP1B3P54709 279 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 HSD11B2P80365 405 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 ATXN7L3Q14CW9 347 aaPredicted RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 CDNFQ49AH0 187 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 LIN54Q6MZP7 749 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 C17orf82Q86X59 251 aaPredicted RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 ZBTB8AQ96BR9 441 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 FGGYQ96C11 551 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 CHRNA10Q9GZZ6 450 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 GDF2Q9UK05 429 aaPredicted RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 PCDHB10Q9UN67 800 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 NPIPA1Q9UND3 350 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 KIF26BQ2KJY2 2108 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 ARPC4-TTLL3A0A0A6YYG9 625 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 GPR31O00270 319 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 HLA-AP01891 365 aaKnown RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 STK11Q15831 433 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 SLC22A6Q4U2R8 563 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 C14orf28Q4W4Y0 310 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 FJX1Q86VR8 437 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 PUSL1Q8N0Z8 303 aaKnown RBP14.72□□□□□ -0.05
LIG1-206ENST00000594067 GVQW1Q8N7I0 195 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 ZNF441Q8N8Z8 693 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 CHST4Q8NCG5 386 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 TSTD1Q8NFU3 115 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 ASB10Q8WXI3 467 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 FAM46BQ96A09 425 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 MVB12AQ96EY5 273 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 SLCO5A1Q9H2Y9 848 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 CNTD2Q9H8S5 307 aa14.72□□□□□ -0.05
LIG1-206ENST00000594067 H2BFMP0C1H6 154 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 CAPZA1P52907 286 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 C1orf100Q5SVJ3 147 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 C3orf33Q6P1S2 294 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 UQCC3Q6UW78 93 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 THAP3Q8WTV1 239 aaPredicted RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 MESP1Q9BRJ9 268 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 DUSP15Q9H1R2 295 aaPredicted RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 GAREM1Q9H706 876 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 SLC39A1Q9NY26 324 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 NDRG3Q9UGV2 375 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 TMEM218A2RU14 115 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 DISC1C4P0D8 188 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 H7C2Y5 167 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 ADAM10O14672 748 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 BDKRB2P30411 391 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 DLSTP36957 453 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 GNALP38405 381 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 CXADRP78310 365 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 POU3F1Q03052 451 aaPredicted RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 CFHR1Q03591 330 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 OR52W1Q6IF63 320 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 ZNF704Q6ZNC4 412 aaPredicted RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 TRAPPC6BQ86SZ2 158 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 CCDC36Q8IYA8 594 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 TSNAXQ99598 290 aaKnown RBP14.71□□□□□ -0.05
LIG1-206ENST00000594067 SLC2A4RGQ9NR83 387 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 RHBDD3Q9Y3P4 386 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 CPAMD8Q8IZJ3 1885 aa14.71□□□□□ -0.05
LIG1-206ENST00000594067 LOC390937A0A1W2PQ73 354 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ZNF98A6NK75 572 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 SULT2B1O00204 365 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ISG15P05161 165 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 HLA-GP17693 338 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 RAB30Q15771 203 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 HFEQ30201 348 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 TMEM244Q5VVB8 128 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 TMEM88Q6PEY1 159 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 LYPD6Q86Y78 171 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 LDLRAD3Q86YD5 345 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 SMRP1Q8NCR6 262 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 CTSFQ9UBX1 484 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 VDAC3Q9Y277 283 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 PRUNE2Q8WUY3 3088 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms