RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 F5H5K5 113 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 GNGT2O14610 69 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 SURF4O15260 269 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 SOX14O95416 240 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 CST1P01037 141 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 IFNGP01579 166 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 PYCR1P32322 319 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 SRP14P37108 136 aaKnown RBP12.94□□□□□ -0.34
TRIM28-203ENST00000593582 ZNF362Q5T0B9 420 aaPredicted RBP12.94□□□□□ -0.34
TRIM28-203ENST00000593582 ACSM5Q6NUN0 579 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 AQP12AQ8IXF9 295 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 ADGRG5Q8IZF4 528 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 SLC37A3Q8NCC5 494 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 ZNF582Q96NG8 517 aaPredicted RBP12.94□□□□□ -0.34
TRIM28-203ENST00000593582 DDOQ99489 341 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 IL19Q9UHD0 177 aa12.94□□□□□ -0.34
TRIM28-203ENST00000593582 ISPDA4D126 451 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 RIIAD1A6NNX1 92 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 RNF212BA8MTL3 300 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 PHF1O43189 567 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-203ENST00000593582 ERFP50548 548 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 FLOT2Q14254 428 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 RSPO1Q2MKA7 263 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-203ENST00000593582 KRTAP27-1Q3LI81 207 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 OR2T2Q6IF00 324 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 SLC27A4Q6P1M0 643 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 CD300LDQ6UXZ3 194 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 Q6ZR03 302 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 OR5AS1Q8N127 324 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 OR51L1Q8NGJ5 315 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 TEX47Q8TBZ9 253 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 GIPC3Q8TF64 312 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 CANT1Q8WVQ1 401 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 FEVQ99581 238 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 GAL3ST1Q99999 423 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 RBM4Q9BWF3 364 aaKnown RBP12.93□□□□□ -0.34
TRIM28-203ENST00000593582 HCAR1Q9BXC0 346 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 C1QTNF5Q9BXJ0 243 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 ARMC1Q9NVT9 282 aa12.93□□□□□ -0.34
TRIM28-203ENST00000593582 TRAV20A0A0B4J274 112 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 ARRDC5A6NEK1 342 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 H3BN98 237 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 IGHV2-5P01817 119 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 LCATP04180 440 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 SELEP16581 610 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 ZNF3P17036 446 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 FMO3P31513 532 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 SLC25A1P53007 311 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 TPTEP56180 551 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 MALLQ13021 153 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 CRMP1Q14194 572 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 SPRNQ5BIV9 151 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 COLCA1Q6ZS62 124 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 ATG16L2Q8NAA4 619 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 OR8G5Q8NG78 346 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 OR13G1Q8NGZ3 307 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 SPTSSAQ969W0 71 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 OR2V2Q96R30 315 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 NIPSNAP1Q9BPW8 284 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 YY1AP1Q9H869 796 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 PNRC2Q9NPJ4 139 aaKnown RBP12.92□□□□□ -0.34
TRIM28-203ENST00000593582 PPP1R3CQ9UQK1 317 aa12.92□□□□□ -0.34
TRIM28-203ENST00000593582 M0R135 149 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 DEAF1O75398 565 aaPredicted RBP12.91□□□□□ -0.34
TRIM28-203ENST00000593582 E2F6O75461 281 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 GYPBP06028 91 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 SPI1P17947 270 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 RPS27P42677 84 aaKnown RBP12.91□□□□□ -0.34
TRIM28-203ENST00000593582 BLVRAP53004 296 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 FAHD2BQ6P2I3 314 aaPredicted RBP12.91□□□□□ -0.34
TRIM28-203ENST00000593582 BHLHE23Q8NDY6 225 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 SPATA3Q8NHX4 192 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 ITLN1Q8WWA0 313 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 ZNRF4Q8WWF5 429 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 ZNF799Q96GE5 643 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 FAHD2AQ96GK7 314 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 NMNAT2Q9BZQ4 307 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 WDR76Q9H967 626 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 TMEM106BQ9NUM4 274 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 UBAP1Q9NZ09 502 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 PDP1Q9P0J1 537 aaPredicted RBP12.91□□□□□ -0.34
TRIM28-203ENST00000593582 NPTNQ9Y639 398 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 COMMD3-BMI1R4GMX3 469 aa12.91□□□□□ -0.34
TRIM28-203ENST00000593582 IQCF6A8MYZ5 107 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 DNAJC8O75937 253 aaPredicted RBP12.9□□□□□ -0.34
TRIM28-203ENST00000593582 SPARCP09486 303 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 SLC6A9P48067 706 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 ENTPD1P49961 510 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 GK2Q14410 553 aaPredicted RBP12.9□□□□□ -0.34
TRIM28-203ENST00000593582 LYPD4Q6UWN0 246 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 PGAP1Q75T13 922 aa12.9□□□□□ -0.34
TRIM28-203ENST00000593582 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms