RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 NCK1P16333 377 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 RHCEP18577 417 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 MTNR1AP48039 350 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 DNM1P34Q6PK57 102 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 PARP8Q8N3A8 854 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 UPRTQ96BW1 309 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 PLEKHA8Q96JA3 519 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 KCTD14Q9BQ13 255 aaPredicted RBP20.02■□□□□ 0.8
LSM4-202ENST00000593564 EFCAB1Q9HAE3 211 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 KRCC1Q9NPI7 259 aaPredicted RBP20.02■□□□□ 0.8
LSM4-202ENST00000593564 RPS6KA6Q9UK32 745 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 AURKCQ9UQB9 309 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 A0A1B0GWJ7 208 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 UNC119BA6NIH7 251 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 LRRC30A6NM36 301 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 GPANK1O95872 356 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 GNB2P62879 340 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 COX10Q12887 443 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 SEC23BQ15437 767 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 SLC9A3R2Q15599 337 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 MEP1BQ16820 701 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 COLCA1Q6ZS62 124 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 MOGAT3Q86VF5 341 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 RAB40AQ8WXH6 277 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 NEIL1Q96FI4 390 aaPredicted RBP20.01■□□□□ 0.79
LSM4-202ENST00000593564 TSSK2Q96PF2 358 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 TMEM246Q9BRR3 403 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 CCDC134Q9H6E4 229 aa20.01■□□□□ 0.79
LSM4-202ENST00000593564 UNKLQ9H9P5 680 aaKnown RBP20.01■□□□□ 0.79
LSM4-202ENST00000593564 IGLV1-36A0A0B4J1U3 117 aa20■□□□□ 0.79
LSM4-202ENST00000593564 TRBV4-1A0A0J9YWV2 114 aa20■□□□□ 0.79
LSM4-202ENST00000593564 F5H5P2 479 aa20■□□□□ 0.79
LSM4-202ENST00000593564 DCTN6O00399 190 aa20■□□□□ 0.79
LSM4-202ENST00000593564 PLATP00750 562 aa20■□□□□ 0.79
LSM4-202ENST00000593564 SELEP16581 610 aa20■□□□□ 0.79
LSM4-202ENST00000593564 CENPAP49450 140 aa20■□□□□ 0.79
LSM4-202ENST00000593564 IL13RA1P78552 427 aa20■□□□□ 0.79
LSM4-202ENST00000593564 RSPO1Q2MKA7 263 aaPredicted RBP20■□□□□ 0.79
LSM4-202ENST00000593564 KRTAP27-1Q3LI81 207 aa20■□□□□ 0.79
LSM4-202ENST00000593564 ZNF404Q494X3 552 aa20■□□□□ 0.79
LSM4-202ENST00000593564 LEG1Q6P5S2 330 aa20■□□□□ 0.79
LSM4-202ENST00000593564 CORO6Q6QEF8 472 aa20■□□□□ 0.79
LSM4-202ENST00000593564 SMARCD3Q6STE5 483 aa20■□□□□ 0.79
LSM4-202ENST00000593564 ZSCAN2Q7Z7L9 614 aaPredicted RBP20■□□□□ 0.79
LSM4-202ENST00000593564 C1orf87Q8N0U7 546 aa20■□□□□ 0.79
LSM4-202ENST00000593564 BHLHE23Q8NDY6 225 aa20■□□□□ 0.79
LSM4-202ENST00000593564 C7orf34Q96L11 122 aa20■□□□□ 0.79
LSM4-202ENST00000593564 DHRS1Q96LJ7 313 aa20■□□□□ 0.79
LSM4-202ENST00000593564 TMEM100Q9NV29 134 aa20■□□□□ 0.79
LSM4-202ENST00000593564 ABCD2Q9UBJ2 740 aa20■□□□□ 0.79
LSM4-202ENST00000593564 IGHV3OR16-10A0A075B7F0 116 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 CCDC22O60826 627 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 GATA4P43694 442 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 NUDT2P50583 147 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 NLRC3Q7RTR2 1065 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 OR8B3Q8NGG8 313 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 OR8B2Q96RD0 313 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 FUZQ9BT04 418 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 HCAR1Q9BXC0 346 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 WDR76Q9H967 626 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 B9D1Q9UPM9 204 aa19.99■□□□□ 0.79
LSM4-202ENST00000593564 IGHV3-64DA0A0J9YX35 117 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 POM121CA8CG34 1229 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 KCNAB3O43448 404 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 PPP1R3DO95685 299 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 PMELP40967 661 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 OR6V1Q8N148 313 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 CELF2-AS1Q8N7Q2 184 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 SLC26A10Q8NG04 563 aa19.98■□□□□ 0.79
LSM4-202ENST00000593564 ERMAPQ96PL5 475 aaPredicted RBP19.98■□□□□ 0.79
LSM4-202ENST00000593564 SOX21Q9Y651 276 aaPredicted RBP19.98■□□□□ 0.79
LSM4-202ENST00000593564 TRAV40A0A0B4J280 105 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 KIR2DS1A0A191URI9 304 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 ACSM4P0C7M7 580 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 FPR3P25089 353 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 MDH1P40925 334 aaKnown RBP19.97■□□□□ 0.79
LSM4-202ENST00000593564 PITPNBP48739 271 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 ECH1Q13011 328 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 FAM201AQ5SY85 155 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 JAZF1Q86VZ6 243 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 OR52J3Q8NH60 311 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 FANK1Q8TC84 345 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 Q8TCH9 128 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 ERGIC1Q969X5 290 aa19.97■□□□□ 0.79
LSM4-202ENST00000593564 SRA1Q9HD15 236 aaKnown RBP19.97■□□□□ 0.79
LSM4-202ENST00000593564 DCAF13Q9NV06 445 aaKnown RBP19.97■□□□□ 0.79
LSM4-202ENST00000593564 SAMD4AQ9UPU9 718 aaKnown RBP19.97■□□□□ 0.79
LSM4-202ENST00000593564 ARPC3O15145 178 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 DIRAS1O95057 198 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 HLA-DPB1P04440 258 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 GK2Q14410 553 aaPredicted RBP19.96■□□□□ 0.79
LSM4-202ENST00000593564 KRT72Q14CN4 511 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 RFX4Q33E94 735 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 GLYATQ6IB77 296 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 SLC18B1Q6NT16 456 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 CFAP77Q6ZQR2 320 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 FAM86B1Q8N7N1 296 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 NMNAT3Q96T66 252 aa19.96■□□□□ 0.79
LSM4-202ENST00000593564 NUDT16L1Q9BRJ7 211 aaKnown RBP19.96■□□□□ 0.79
LSM4-202ENST00000593564 CLN8Q9UBY8 286 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms