RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 TNFRSF13CQ96RJ3 184 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ECSITQ9BQ95 431 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 RSG1Q9BU20 258 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 MFSD1Q9H3U5 465 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CLMPQ9H6B4 373 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 FNDC4Q9H6D8 234 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 MOB1AQ9H8S9 216 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 WDR41Q9HAD4 459 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 GNB4Q9HAV0 340 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 PLEKHA3Q9HB20 300 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 NMRAL1Q9HBL8 299 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 HRASLSQ9HDD0 168 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 DIABLOQ9NR28 239 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 INPP5EQ9NRR6 644 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 C1orf109Q9NX04 203 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 RSPH14Q9UHP6 348 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 FZR1Q9UM11 496 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 EIF3LQ9Y262 564 aaKnown RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ERGIC3Q9Y282 383 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 POLR3HQ9Y535 204 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ETV7Q9Y603 341 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 SETD2Q9BYW2 2564 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 TICRRQ7Z2Z1 1910 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 LOC285556D6RIA3 1793 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CREBBPQ92793 2442 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 TRGV8A0A0C4DH27 118 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1W2PPV9 198 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1W2PQL4 384 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 LRP5LA4QPB2 252 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 EFCAB10A6NFE3 127 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 H0YL77 283 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 GALR3O60755 368 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 SLC19A2O60779 497 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RAMP3O60896 148 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 LRATO95237 230 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PSMG1O95456 288 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ANGPTL1O95841 491 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 FGGP02679 453 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 IFNW1P05000 195 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 SERPINA5P05154 406 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 HOXD4P09016 255 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RD3LP0DJH9 198 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CD36P16671 472 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 BCKDHBP21953 392 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PSMB5P28074 263 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 GJB2P29033 226 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 IFNA8P32881 189 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 HPCAL1P37235 193 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 MAGEA6P43360 314 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RANBP1P43487 201 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RGRP47804 291 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 DNASE1L1P49184 302 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CDK9P50750 372 aaKnown RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 NKX2-5P52952 324 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CRYBA2P53672 197 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 BACE1P56817 501 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 FKBP1AP62942 108 aaKnown RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 EWSR1Q01844 656 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PAX2Q02962 417 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 MGAT3Q09327 533 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ATXN7L3Q14CW9 347 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 POU2AF1Q16633 256 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CCDC58Q4VC31 144 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 IDNKQ5T6J7 187 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 METTL21CQ5VZV1 264 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 SPINK14Q6IE38 97 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ANKRD26P1Q6NSI1 321 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ABHD13Q7L211 337 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ASRGL1Q7L266 308 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 SETD3Q86TU7 594 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 C17orf64Q86WR6 236 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 HIPK1Q86Z02 1210 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CYP4Z2PQ8N1L4 340 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 TMEM156Q8N614 296 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 CDRT4Q8N9R6 151 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 OR10A7Q8NGE5 316 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 OR52E5Q8NH55 327 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RDH11Q8TC12 318 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 AP3S1Q92572 193 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 NOL4LQ96MY1 436 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 UTP23Q9BRU9 249 aaKnown RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 TIMM29Q9BSF4 260 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 RHOJQ9H4E5 214 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PRSS16Q9NQE7 514 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PLEKHJ1Q9NW61 149 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 BABAM2Q9NXR7 383 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 EIF3KQ9UBQ5 218 aaKnown RBP3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ERVW-1Q9UQF0 538 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 WIF1Q9Y5W5 379 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 FKBP7Q9Y680 259 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 STYXL1Q9Y6J8 313 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 ZFHX3Q15911 3703 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PTPRFP10586 1907 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 MROH7Q68CQ1 1323 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 MYO7AQ13402 2215 aa3.89□□□□□ -1.79
SMAD4-216ENST00000593223 PRSS37A4D1T9 235 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms