RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 UPK3AO75631 287 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 MT-ND2P03891 347 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 GYPBP06028 91 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 LIMS3P0CW19 117 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 LIMS4P0CW20 117 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 COX5AP20674 150 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 PSMB9P28065 219 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 C21orf33P30042 268 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 NAA10P41227 235 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 PSMD7P51665 324 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 TMBIM6P55061 237 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 LCN6P62502 163 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 SIRPAP78324 504 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 TPBGQ13641 420 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 LY6DQ14210 128 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 C3AR1Q16581 482 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 ELFN2Q5R3F8 820 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 TIMM23BQ5SRD1 257 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 TSPO2Q5TGU0 170 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 DRAM2Q6UX65 266 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 NUFIP2Q7Z417 695 aaKnown RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 LHFPL3Q86UP9 236 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 FTMTQ8N4E7 242 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 YIPF7Q8N8F6 280 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 OR4F15Q8NGB8 312 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 OR51L1Q8NGJ5 315 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 RAB2BQ8WUD1 216 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 MUL1Q969V5 352 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 DGCR14Q96DF8 476 aaKnown RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 STARD4Q96DR4 205 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 TSSK2Q96PF2 358 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 BBC3Q96PG8 261 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 OR8B4Q96RC9 309 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 ATF6BQ99941 703 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 ABHD6Q9BV23 337 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 HCAR1Q9BXC0 346 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 RNF121Q9H920 327 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 DDX28Q9NUL7 540 aaKnown RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 EIF3KQ9UBQ5 218 aaKnown RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 ERRFI1Q9UJM3 462 aaPredicted RBP6.42□□□□□ -1.38
SMAD4-210ENST00000590061 GNG8Q9UK08 70 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 UGT2A1Q9Y4X1 527 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 MYO18BQ8IUG5 2567 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 IGSF10Q6WRI0 2623 aa6.42□□□□□ -1.38
SMAD4-210ENST00000590061 NCOA6Q14686 2063 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 FREM1Q5H8C1 2179 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 VGLL3A8MV65 326 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 A8MXE2 369 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 C16orf97H3BN30 126 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 J3QLW9 94 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 M0R129 80 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 DCTN6O00399 190 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 CCL21O00585 134 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 PLPP2O43688 288 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 MTRF1O75570 445 aaKnown RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 GATBO75879 557 aaKnown RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 TNFSF13O75888 250 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ARL6IP5O75915 188 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 SEC14L2O76054 403 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 TFP02787 698 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 RAF1P04049 648 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 CD2P06729 351 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 HTR1AP08908 422 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 UBCP0CG48 685 aaKnown RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 HSMCR30P0CW71 290 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 CLUP10909 449 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ZNF19P17023 458 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 PCMT1P22061 227 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 GABRA5P31644 462 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ALDH3B2P48448 385 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ETV1P50549 477 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ASCL1P50553 236 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 TUBA1BP68363 451 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 HIST1H3AP68431 136 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ARF1P84077 181 aaKnown RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 FMODQ06828 376 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 MALLQ13021 153 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 NEDD8Q15843 81 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ZNF124Q15973 351 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 GSG1Q2KHT4 349 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 FBXL19-AS1Q494R0 122 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 YIF1BQ5BJH7 314 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 ARMCX4Q5H9R4 360 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 HIST2H3PS2Q5TEC6 136 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 TMEM244Q5VVB8 128 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 HIST2H3AQ71DI3 136 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 BHLHA15Q7RTS1 189 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 DCXRQ7Z4W1 244 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 LUZP2Q86TE4 346 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 CROCCP3Q8IVE0 287 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 GCNT2Q8N0V5 402 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 GABRG1Q8N1C3 465 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 OR1K1Q8NGR3 316 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 OR1F12Q8NHA8 337 aa6.41□□□□□ -1.38
SMAD4-210ENST00000590061 BCL2L2Q92843 193 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-210ENST00000590061 C10orf35Q96D05 121 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms