RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TMEM38AQ9H6F2 299 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 BCL2L10Q9HD36 194 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 CLCF1Q9UBD9 225 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 SLC35A3Q9Y2D2 325 aa6.62□□□□□ -1.35
ATG4D-210ENST00000588972 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 CCT8L1PA6NM43 557 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF587BE7ETH6 402 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 TNFSF11O14788 317 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 TPST1O60507 370 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 GCM2O75603 506 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 NTN1O95631 604 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 EPPINO95925 133 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 OPN1SWP03999 348 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 SBK2P0C263 348 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 PABPC4LP0CB38 370 aaKnown RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 IRF2P14316 349 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 CPN1P15169 458 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 PGCP20142 388 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 IDH2P48735 452 aaKnown RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 NUDT2P50583 147 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 DMTNQ08495 405 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF415Q09FC8 603 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 GNA13Q14344 377 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 GLYR1Q49A26 553 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 IFI44LQ53G44 452 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF311Q5JNZ3 666 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 PRAMEF7Q5VXH5 474 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 REEP3Q6NUK4 255 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 NET1Q7Z628 596 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 LACC1Q8IV20 430 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 LRRC75A-AS1Q8N1F1 130 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 C9orf106Q8NAJ2 232 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF563Q8TA94 476 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZPLD1Q8TCW7 415 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ADGRG7Q96K78 797 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 FAM71F1Q96KD3 344 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 PRRG4Q9BZD6 226 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 RAB9BQ9NP90 201 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 EXOSC3Q9NQT5 275 aaKnown RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 CTPS2Q9NRF8 586 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 GSN-AS1Q9NRJ2 163 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF701Q9NV72 531 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 CMTM6Q9NX76 183 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF629Q9UEG4 869 aaPredicted RBP6.61□□□□□ -1.35
ATG4D-210ENST00000588972 ANGPT4Q9Y264 503 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 AP4B1Q9Y6B7 739 aa6.61□□□□□ -1.35
ATG4D-210ENST00000588972 A0A0J9YW62 118 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CFAP73A6NFT4 308 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SLC22A20A6NK97 555 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 EEF1E1-BLOC1S5C9J1V9 151 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 E9PI62 339 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 NME4O00746 187 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SOCS2O14508 198 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 EEF1E1O43324 174 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CXCL13O43927 109 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 TGM6O95932 706 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 HLA-DOBP13765 273 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ETS2P15036 469 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CCNA2P20248 432 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ELK4P28324 431 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CEACAM8P31997 349 aaPredicted RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 TIMP3P35625 211 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 EIF1P41567 113 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ACAA2P42765 397 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 MAGEB1P43366 347 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 IER3P46695 156 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 PCYT1AP49585 367 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF136P52737 540 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 MERTKQ12866 999 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 PON3Q15166 354 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SLC25A53Q5H9E4 307 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 FAM166AQ6J272 317 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SATL1Q86VE3 508 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CALHM3Q86XJ0 350 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 MEX3DQ86XN8 651 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 MED12LQ86YW9 2145 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 GRAMD2AQ8IUY3 354 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SERPINA12Q8IW75 414 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 GCNT2Q8N0V5 402 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CIARTQ8N365 385 aaPredicted RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CADM2Q8N3J6 435 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SMYD1Q8NB12 490 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 OR8J3Q8NGG0 315 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 OR10D3Q8NH80 312 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ST8SIA1Q92185 356 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 RPL36ALQ969Q0 106 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 TAMM41Q96BW9 452 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SGK494Q96LW2 274 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ZNF583Q96ND8 569 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 ECSITQ9BQ95 431 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 WFDC6Q9BQY6 131 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SF3B5Q9BWJ5 86 aaKnown RBP6.6□□□□□ -1.35
ATG4D-210ENST00000588972 PINK1Q9BXM7 581 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 SRXN1Q9BYN0 137 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 OR11A1Q9GZK7 315 aa6.6□□□□□ -1.35
ATG4D-210ENST00000588972 CSTL1Q9H114 145 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms