RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 C1orf87Q8N0U7 546 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 FAM156AQ8NDB6 213 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 APOBEC3DQ96AK3 386 aaPredicted RBP13.56□□□□□ -0.24
NPC1-205ENST00000587163 FAM71F1Q96KD3 344 aaPredicted RBP13.56□□□□□ -0.24
NPC1-205ENST00000587163 ZNF570Q96NI8 536 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 FNDC11Q9BVV2 318 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 SYT4Q9H2B2 425 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 TMEM100Q9NV29 134 aa13.56□□□□□ -0.24
NPC1-205ENST00000587163 CENPVL3A0A0U1RRI6 287 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 TIMM23O14925 209 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
NPC1-205ENST00000587163 MMP9P14780 707 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 CFHR2P36980 270 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 GATA4P43694 442 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 TTMPQ5BVD1 217 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 ZNF620Q6ZNG0 422 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 DCDC5Q6ZRR9 648 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 TMPRSS11FQ6ZWK6 438 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 C1QL4Q86Z23 238 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 RNF113BQ8IZP6 322 aaKnown RBP13.55□□□□□ -0.24
NPC1-205ENST00000587163 TMEM86BQ8N661 226 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 LINC01006Q8NI28 216 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 ACOT11Q8WXI4 607 aaPredicted RBP13.55□□□□□ -0.24
NPC1-205ENST00000587163 TBX15Q96SF7 602 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 NMNAT1Q9HAN9 279 aaPredicted RBP13.55□□□□□ -0.24
NPC1-205ENST00000587163 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
NPC1-205ENST00000587163 ATPIF1Q9UII2 106 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 TMCC3Q9ULS5 477 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 RNF114Q9Y508 228 aa13.55□□□□□ -0.24
NPC1-205ENST00000587163 A0A0G2JND7 137 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 ZNF879B4DU55 563 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 MRASO14807 208 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
NPC1-205ENST00000587163 FAM20BO75063 409 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 FPR3P25089 353 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 IFNA8P32881 189 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 HIST1H3AP68431 136 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 KRR1Q13601 381 aaKnown RBP13.54□□□□□ -0.24
NPC1-205ENST00000587163 MPPED2Q15777 294 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 MEP1BQ16820 701 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 HIST2H3PS2Q5TEC6 136 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 METTL21CQ5VZV1 264 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 CORO6Q6QEF8 472 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 MBOAT2Q6ZWT7 520 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 HIST2H3AQ71DI3 136 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 Q8TCH9 128 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 NUAK2Q9H093 628 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 UFSP2Q9NUQ7 469 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 VSX1Q9NZR4 365 aaPredicted RBP13.54□□□□□ -0.24
NPC1-205ENST00000587163 CTSZQ9UBR2 303 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 LHFPL6Q9Y693 200 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 POMT1Q9Y6A1 747 aa13.54□□□□□ -0.24
NPC1-205ENST00000587163 FAM220BPB1ANY3 271 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 P2RY10O00398 339 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 GPR137BO60478 399 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 PTP4A3O75365 173 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 TOX4O94842 621 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 IGHV4-59P01825 116 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 IFNW1P05000 195 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 IRF2P14316 349 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 RAD23AP54725 363 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 PROK1P58294 105 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
NPC1-205ENST00000587163 PRAMEF6Q5VXH4 476 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 COLCA1Q6ZS62 124 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
NPC1-205ENST00000587163 NAA40Q86UY6 237 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 OR2T12Q8NG77 320 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 SSMEM1Q8WWF3 244 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 DYRK2Q92630 601 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 TECTBQ96PL2 329 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 COQ7Q99807 217 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
NPC1-205ENST00000587163 INTS9Q9NV88 658 aaKnown RBP13.53□□□□□ -0.24
NPC1-205ENST00000587163 DCTN6O00399 190 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 SOCS2O14508 198 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
NPC1-205ENST00000587163 FCN3O75636 299 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 CLPXO76031 633 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 TSPAN15O95858 294 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 NPPAP01160 153 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 SDHAP31040 664 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 CD200P41217 278 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 CDKN2AP42771 156 aaKnown RBP13.52□□□□□ -0.25
NPC1-205ENST00000587163 GK2Q14410 553 aaPredicted RBP13.52□□□□□ -0.25
NPC1-205ENST00000587163 PDCD1Q15116 288 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 TAF9Q16594 264 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 COQ5Q5HYK3 327 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
NPC1-205ENST00000587163 TSEN54Q7Z6J9 526 aaKnown RBP13.52□□□□□ -0.25
NPC1-205ENST00000587163 CELF2-AS1Q8N7Q2 184 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 GJC3Q8NFK1 279 aa13.52□□□□□ -0.25
NPC1-205ENST00000587163 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms