RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ST3GAL3Q11203 375 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 FAM98BQ52LJ0 330 aaKnown RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 MESTQ5EB52 335 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 LYPD2Q6UXB3 125 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 SYT9Q86SS6 491 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 OAFQ86UD1 273 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 KLBQ86Z14 1044 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 C10orf67Q8IYJ2 551 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 C1orf174Q8IYL3 243 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 OR10AD1Q8NGE0 317 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 PTP4A1Q93096 173 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 TMIGD2Q96BF3 282 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 RASD2Q96D21 266 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 C7orf34Q96L11 122 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 PRRC1Q96M27 445 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 RERGLQ9H628 205 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 IL1RAPQ9NPH3 570 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 CGGBP1Q9UFW8 167 aaPredicted RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 NDRG4Q9ULP0 352 aaKnown RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 FAM32AQ9Y421 112 aaKnown RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 ENPP4Q9Y6X5 453 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 TRAV40A0A0B4J280 105 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 TCRBV3S1A0A5B6 114 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 HTR3EA5X5Y0 456 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 A6NIZ1 184 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 F5H5P2 479 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 RER1O15258 196 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 MLNRO43193 412 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 PLATP00750 562 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 HLA-DPB1P04440 258 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 COX5BP10606 129 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 RHCEP18577 417 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 TNFSF4P23510 183 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 MDH2P40926 338 aaKnown RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 SLC9A3P48764 834 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 SMIM11AP58511 58 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 RAP1BP61224 184 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 RAP1AP62834 184 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 IL13RA1P78552 427 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 MIDNQ504T8 468 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 ESCO2Q56NI9 601 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 C1orf146Q5VVC0 180 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 C16orf87Q6PH81 154 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 ARL9Q6T311 187 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 FAM122BQ7Z309 247 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 TSEN54Q7Z6J9 526 aaKnown RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 ZER1Q7Z7L7 766 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 MOGAT3Q86VF5 341 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 KIR3DL3Q8N743 410 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 UTP4Q969X6 686 aaKnown RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 DACT3Q96B18 629 aaPredicted RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 MEGF10Q96KG7 1140 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 TMEM246Q9BRR3 403 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 SSBP3Q9BWW4 388 aaPredicted RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 ANKRD19PQ9H560 264 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 YY1AP1Q9H869 796 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 WDR76Q9H967 626 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 PDP1Q9P0J1 537 aaPredicted RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 OR5V1Q9UGF6 321 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 IL20RAQ9UHF4 553 aa9.71□□□□□ -0.86
LIG3-207ENST00000586119 PRKDCP78527 4128 aaKnown RBP9.71□□□□□ -0.86
LIG3-207ENST00000586119 IGHV2-70DA0A0C4DH43 119 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 TEX13CA0A0J9YWL9 993 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 DHRS12A0PJE2 317 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 OR6C6A6NF89 314 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 POM121CA8CG34 1229 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 SLC16A7O60669 478 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 FABP3P05413 133 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 RAP2AP10114 183 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 NR2C1P13056 603 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 RPS2P15880 293 aaKnown RBP9.7□□□□□ -0.86
LIG3-207ENST00000586119 RPL4P36578 427 aaKnown RBP9.7□□□□□ -0.86
LIG3-207ENST00000586119 MAGEA2P43356 314 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 KRTAP10-3P60369 221 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 GNB2P62879 340 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 RELBQ01201 579 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 SCRN3Q0VDG4 424 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 GK3PQ14409 553 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 TRAM2Q15035 370 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 MEP1BQ16820 701 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 RUSC1-AS1Q66K80 236 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 SLC27A4Q6P1M0 643 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 PTCHD4Q6ZW05 846 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 SPATC1Q76KD6 591 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.7□□□□□ -0.86
LIG3-207ENST00000586119 NAA40Q86UY6 237 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 SPATA24Q86W54 205 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 OFCC1Q8IZS5 231 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 FAM86B1Q8N7N1 296 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 PAPD5Q8NDF8 572 aaKnown RBP9.7□□□□□ -0.86
LIG3-207ENST00000586119 NPEPL1Q8NDH3 523 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 OR10S1Q8NGN2 331 aa9.7□□□□□ -0.86
LIG3-207ENST00000586119 OR1F12Q8NHA8 337 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms