RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RDH5Q92781 318 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 PTP4A1Q93096 173 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 SPTSSAQ969W0 71 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 SLAMF6Q96DU3 332 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 ZMYND19Q96E35 227 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 CENPNQ96H22 339 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 RAB3IPQ96QF0 476 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 COPS4Q9BT78 406 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 GABARAPL1Q9H0R8 117 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 MSL2Q9HCI7 577 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 CYSLTR2Q9NS75 346 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 CENPMQ9NSP4 180 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 TVP23BQ9NYZ1 205 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 CGGBP1Q9UFW8 167 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 PURGQ9UJV8 347 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 OAZ3Q9UMX2 235 aa10.75□□□□□ -0.69
SMARCE1-218ENST00000582955 ZSCAN5BA6NJL1 495 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 SAC3D1A6NKF1 404 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 M0R135 149 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 CDC14BO60729 498 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 IGHV1-46P01743 117 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 LCATP04180 440 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 ACHEP22303 614 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 IGFBP5P24593 272 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 COL8A2P25067 703 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 GIFP27352 417 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 SLC6A9P48067 706 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 RPS7P62081 194 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 ESRRGP62508 458 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 EIF2B1Q14232 305 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 HLXQ14774 488 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 PTGES3Q15185 160 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 RSPO1Q2MKA7 263 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 TMEM249Q2WGJ8 235 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 KRTAP27-1Q3LI81 207 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 TEX30Q5JUR7 227 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 ZFP1Q6P2D0 407 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 SPATC1Q76KD6 591 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 CXXC5Q7LFL8 322 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 DPY19L4Q7Z388 723 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 OR5AS1Q8N127 324 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 HAVCR1Q96D42 359 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF799Q96GE5 643 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 PRRG3Q9BZD7 231 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 CHODLQ9H9P2 273 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 SAP30LQ9HAJ7 183 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 DDX28Q9NUL7 540 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 NKIRAS2Q9NYR9 191 aa10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 CHD3Q12873 2000 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-218ENST00000582955 CSPG4Q6UVK1 2322 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 IGHV4-61A0A0C4DH41 118 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF878C9JN71 531 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 PRODHO43272 600 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 RAC2P15153 192 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 KITLGP21583 273 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 PPP2R2BQ00005 443 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 KRTAP1-1Q07627 177 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 MALLQ13021 153 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 PCK2Q16822 640 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 FAM209AQ5JX71 171 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 KDM4DQ6B0I6 523 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 USP51Q70EK9 711 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 SHFQ7M4L6 423 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 NAA40Q86UY6 237 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 C10orf67Q8IYJ2 551 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 BBS1Q8NFJ9 593 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 YIPF5Q969M3 257 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 CIB1Q99828 191 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 PKP2Q99959 881 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 C1QTNF5Q9BXJ0 243 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 EGLN1Q9GZT9 426 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 ZNF275Q9NSD4 429 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 ENOPH1Q9UHY7 261 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 ZDHHC8Q9ULC8 765 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 N6AMT1Q9Y5N5 214 aa10.73□□□□□ -0.69
SMARCE1-218ENST00000582955 IGHV1-69-2A0A0G2JMI3 117 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 LRP5LA4QPB2 252 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 H3BNX3 289 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 M0R129 80 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 PPIHO43447 177 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 CD5LO43866 347 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 SELENOFO60613 162 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 TNFSF4P23510 183 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 HSD11B1P28845 292 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 EPHA2P29317 976 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 NAA10P41227 235 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 SLC15A1P46059 708 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 GPR6P46095 362 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 PRKXP51817 358 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 PRSS12P56730 875 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 MRPS11P82912 194 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 TNFAIP6P98066 277 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 RIN1Q13671 783 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 APOFQ13790 326 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 TRIP10Q15642 601 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 SLC35D3Q5M8T2 416 aa10.72□□□□□ -0.69
SMARCE1-218ENST00000582955 SLX4IPQ5VYV7 408 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms