RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OR6F1Q8NGZ6 308 aa20.03■□□□□ 0.8
CCDC47-204ENST00000582252 FAM3DQ96BQ1 224 aa20.03■□□□□ 0.8
CCDC47-204ENST00000582252 ZNF275Q9NSD4 429 aaPredicted RBP20.03■□□□□ 0.8
CCDC47-204ENST00000582252 NAP1L6A6NFF2 107 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 DHHO43323 396 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 XRCC3O43542 346 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 DHFRP00374 187 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 ITGA5P08648 1049 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 RFPL3SP0C7P2 107 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 CD37P11049 281 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 SPINK2P20155 84 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 HTR2CP28335 458 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 PTH2RP49190 550 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 POU3F4P49335 361 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 KLF9Q13886 244 aaPredicted RBP20.02■□□□□ 0.8
CCDC47-204ENST00000582252 WIPI1Q5MNZ9 446 aaPredicted RBP20.02■□□□□ 0.8
CCDC47-204ENST00000582252 ASPHD2Q6ICH7 369 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 ANKRD16Q6P6B7 361 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 GJC3Q8NFK1 279 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 OR2M7Q8NG81 312 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 OR51D1Q8NGF3 324 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 ULBP2Q9BZM5 246 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 MSRB2Q9Y3D2 182 aa20.02■□□□□ 0.8
CCDC47-204ENST00000582252 GLSO94925 669 aaPredicted RBP20.02■□□□□ 0.79
CCDC47-204ENST00000582252 SNTB2Q13425 540 aaKnown RBP20.02■□□□□ 0.79
CCDC47-204ENST00000582252 TBRG1Q3YBR2 411 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 SPINK14Q6IE38 97 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 GLCCI1Q86VQ1 547 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 C20orf196Q8IYI0 205 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 PLPP7Q8NBV4 271 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 SLC7A6Q92536 515 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 CPNE4Q96A23 557 aaPredicted RBP20.02■□□□□ 0.79
CCDC47-204ENST00000582252 AUNIPQ9H7T9 357 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 MOV10Q9HCE1 1003 aaKnown RBP20.02■□□□□ 0.79
CCDC47-204ENST00000582252 FOXD3Q9UJU5 478 aaPredicted RBP20.02■□□□□ 0.79
CCDC47-204ENST00000582252 ALG5Q9Y673 324 aa20.02■□□□□ 0.79
CCDC47-204ENST00000582252 NEURL1O76050 574 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 FOXO1Q12778 655 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 C2orf76Q3KRA6 126 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 ADGRG7Q96K78 797 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF416Q9BWM5 594 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 NCKAP5O14513 1909 aa20.01■□□□□ 0.79
CCDC47-204ENST00000582252 A0A0B4J293 547 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF891A8MT65 544 aaPredicted RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 BTCP35070 178 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 SRSF6Q13247 344 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 ATP1A1-AS1Q5TC04 95 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF283Q8N7M2 679 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 ZIC4Q8N9L1 334 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 OR52I2Q8NH67 350 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 DEDD2Q8WXF8 326 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 SORCS2Q96PQ0 1159 aa20■□□□□ 0.79
CCDC47-204ENST00000582252 RBM24Q9BX46 236 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 PNRC2Q9NPJ4 139 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 DDX28Q9NUL7 540 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 RBMX2Q9Y388 322 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 PHF3Q92576 2039 aaKnown RBP20■□□□□ 0.79
CCDC47-204ENST00000582252 LOC390937A0A1W2PQ73 354 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 RER1O15258 196 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 NKX2-8O15522 239 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CXCL13O43927 109 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CTAG2O75638 210 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 APOC1P02654 83 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ERCC1P07992 297 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CTSSP25774 331 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 BDKRB2P30411 391 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 GNALP38405 381 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CX3CR1P49238 355 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 SELENOPP49908 381 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 PRKXP51817 358 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 GFRA1P56159 465 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 OR1C1Q15619 314 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 C1orf100Q5SVJ3 147 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ATAD3CQ5T2N8 411 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ABLIM2Q6H8Q1 611 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CDH24Q86UP0 819 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 JAGN1Q8N5M9 183 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 OR5D14Q8NGL3 314 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 OR10D3Q8NH80 312 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 FGGYQ96C11 551 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CACNG6Q9BXT2 260 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 FLVCR1Q9Y5Y0 555 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 PINLYPA6NC86 204 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 GGT3PA6NGU5 568 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 DOK2O60496 412 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 F10P00742 488 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ARSBP15848 533 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF20P17024 532 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ZNF121P58317 390 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-204ENST00000582252 CBX3Q13185 183 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 PHYHD1Q5SRE7 291 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 GLYATL3Q5SZD4 288 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ADGRE4PQ86SQ3 457 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 SLC25A28Q96A46 364 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ACTR6Q9GZN1 396 aa19.99■□□□□ 0.79
CCDC47-204ENST00000582252 ZFHX4Q86UP3 3567 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 ARGFXA6NJG6 315 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 TCRBP04435 133 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 HPNP05981 417 aa19.98■□□□□ 0.79
CCDC47-204ENST00000582252 RAG2P55895 527 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms