RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF224Q9NZL3 707 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ATPIF1Q9UII2 106 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 COPS3Q9UNS2 423 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SNX5Q9Y5X3 404 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ZGRF1Q86YA3 2104 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 METTL15A6NJ78 407 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 C16orf97H3BN30 126 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 RER1O15258 196 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 LYZL6O75951 148 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 UBL3O95164 117 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MT-ND2P03891 347 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SMIM18P0DKX4 95 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 COX5BP10606 129 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PSKH1P11801 424 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 JUNBP17275 347 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 OPRL1P41146 370 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 RPS27P42677 84 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 UQCRFS1P47985 274 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ASCL1P50553 236 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 RAB1AP62820 205 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PSG4Q00888 419 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 FAM27E3Q08E93 113 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 IKZF1Q13422 519 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 EIF2B1Q14232 305 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 PDCD1Q15116 288 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SPHARQ15513 63 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 C9orf135Q5VTT2 229 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 UBE2UQ5VVX9 321 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 STEAP3Q658P3 488 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CORO6Q6QEF8 472 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 KLHL24Q6TFL4 600 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 NCCRP1Q6ZVX7 275 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 BHLHA15Q7RTS1 189 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 LUZP2Q86TE4 346 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 LRRC18Q8N456 261 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 KLHL36Q8N4N3 616 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ZNF808Q8N4W9 903 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 WDR31Q8NA23 367 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 OR52N5Q8NH56 324 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SNX33Q8WV41 574 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 FCGR1BQ92637 280 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 OR8B4Q96RC9 309 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ALG8Q9BVK2 526 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MND1Q9BWT6 205 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MROQ9BYG7 248 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MRPS26Q9BYN8 205 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 NIPAL2Q9H841 368 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ISYNA1Q9NPH2 558 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PNRC2Q9NPJ4 139 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 SLC17A5Q9NRA2 495 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 BABAM2Q9NXR7 383 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 FBXL3Q9UKT7 428 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 KLHDC2Q9Y2U9 406 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 LSM2Q9Y333 95 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 KIAA1549Q9HCM3 1950 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 MYO18BQ8IUG5 2567 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 WIPF3A6NGB9 483 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 ACOD1A6NK06 481 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 EEF1E1-BLOC1S5C9J1V9 151 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 EEF1E1O43324 174 aaKnown RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 ABHD16AO95870 558 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CLPTM1O96005 669 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 PTHP01270 115 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 MT-ND5P03915 603 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 TFAP2AP05549 437 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 KRT8P05787 483 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CBR1P16152 277 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 PPP3CBP16298 524 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 ZNF32P17041 273 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 UGT2B10P36537 528 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 WNT4P56705 351 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 UBE2NP61088 152 aaKnown RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 BDH1Q02338 343 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 GPR50Q13585 617 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 RSPO1Q2MKA7 263 aaPredicted RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 KRTAP27-1Q3LI81 207 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 C3orf36Q3SXR2 165 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CCDC58Q4VC31 144 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 HIKESHIQ53FT3 197 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CCDC92Q53HC0 331 aaPredicted RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 ELFN2Q5R3F8 820 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 SYT6Q5T7P8 510 aaPredicted RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 LIPNQ5VXI9 398 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 OTPQ5XKR4 325 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 XAF1Q6GPH4 301 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CFAP77Q6ZQR2 320 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 KCTD8Q6ZWB6 473 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 SSX6Q7RTT6 188 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 LINC00346Q8IVM7 164 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 OR10S1Q8NGN2 331 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 FGFBP3Q8TAT2 258 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CA5BP1Q8WTZ4 195 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 HSD17B8Q92506 261 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 RNASE6Q93091 150 aaKnown RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 SLAMF6Q96DU3 332 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 LRRC46Q96FV0 321 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 COG8Q96MW5 612 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms