RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SYT6Q5T7P8 510 aaPredicted RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 C1orf185Q5T7R7 199 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ZNF774Q6NX45 483 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 XKRXQ6PP77 449 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 COMTD1Q86VU5 262 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 PHC2Q8IXK0 858 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 OR1J1Q8NGS3 322 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ZNF703Q9H7S9 590 aaPredicted RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 PLEKHJ1Q9NW61 149 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 TXNL4BQ9NX01 149 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 SPTBN4Q9H254 2564 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 OR7C1O76099 320 aaPredicted RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 DXOO77932 396 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 S100A9P06702 114 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 HOXD4P09016 255 aaPredicted RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 GABRR1P24046 479 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 DBPQ10586 325 aaPredicted RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 ARL6IP1Q15041 203 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ZNF239Q16600 458 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 CTF1Q16619 201 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 TSPO2Q5TGU0 170 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 AADACL4Q5VUY2 407 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 TMEM81Q6P7N7 255 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 TRAPPC6BQ86SZ2 158 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 TPRA1Q86W33 373 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 NPEPL1Q8NDH3 523 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 OR2G2Q8NGZ5 317 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 SORCS2Q96PQ0 1159 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 OR8B4Q96RC9 309 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 PTTG3PQ9NZH4 202 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ZNF175Q9Y473 711 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 R4GMQ9 66 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ASAH2BP0C7U1 165 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 GABRA2P47869 451 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 PPP5CP53041 499 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 HERV-K104P61576 105 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 IFITM3Q01628 133 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 THOC7Q6I9Y2 204 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ASCC1Q8N9N2 400 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 DCLRE1CQ96SD1 692 aaKnown RBP8.98□□□□□ -0.97
SMG6-213ENST00000573166 OR2B2Q9GZK3 357 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 PBOV1Q9GZY1 135 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 UFSP2Q9NUQ7 469 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 LRRK1Q38SD2 2015 aa8.98□□□□□ -0.97
SMG6-213ENST00000573166 ANKRD61A6NGH8 418 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 XRCC2O43543 280 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 MPGP29372 298 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ZNF93P35789 620 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 TGM4P49221 684 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 CHRFAM7AQ494W8 412 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 FBXW9Q5XUX1 488 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 SLC16A12Q6ZSM3 486 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 DPPA2Q7Z7J5 298 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ARMC10Q8N2F6 343 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ZNF565Q8N9K5 539 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 PLPP7Q8NBV4 271 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 SLC7A6Q92536 515 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 TIMP4Q99727 224 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 EGLN1Q9GZT9 426 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 METTL9Q9H1A3 318 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 LRP12Q9Y561 859 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 NOTOA8MTQ0 251 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ZNF354AO60765 605 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 IL1AP01583 271 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 GTF2F2P13984 249 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 HOXB9P17482 250 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 RAB35Q15286 201 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 OR8G1Q15617 311 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 TMEM108Q6UXF1 575 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 LSRQ86X29 649 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 CCDC36Q8IYA8 594 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 PTP4A1Q93096 173 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 APOBEC3DQ96AK3 386 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 KCNJ15Q99712 375 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 MRI1Q9BV20 369 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 MMP28Q9H239 520 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 GPR173Q9NS66 373 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 KCNIP1Q9NZI2 227 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ZNF224Q9NZL3 707 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ABCA4P78363 2273 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 A0A1B0GVC2 190 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 PTP4A3O75365 173 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 EDN3P14138 238 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 AMY2BP19961 511 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 OXA1LQ15070 435 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 CDK5R1Q15078 307 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 CCDC71Q8IV32 467 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 Q8N402 240 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 ZNF441Q8N8Z8 693 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 REEP6Q96HR9 211 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 DHRS1Q96LJ7 313 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 GPR35Q9HC97 309 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 TAS2R5Q9NYW4 299 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 FBXO9Q9UK97 447 aaPredicted RBP8.97□□□□□ -0.97
SMG6-213ENST00000573166 NCR1O76036 304 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 NXPH2O95156 264 aa8.97□□□□□ -0.97
SMG6-213ENST00000573166 HRGP04196 525 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms