RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
CDH13-214ENST00000569455 PSMG3-AS1Q96PY0 264 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 OR14A2Q96R54 314 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 DCLRE1CQ96SD1 692 aaKnown RBP6.71□□□□□ -1.34
CDH13-214ENST00000569455 KCNJ15Q99712 375 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 ATF6BQ99941 703 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 C6orf62Q9GZU0 229 aaPredicted RBP6.71□□□□□ -1.34
CDH13-214ENST00000569455 NXF2Q9GZY0 626 aaKnown RBP6.71□□□□□ -1.34
CDH13-214ENST00000569455 C12orf49Q9H741 205 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 SP140LQ9H930 580 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 DDX28Q9NUL7 540 aaKnown RBP6.71□□□□□ -1.34
CDH13-214ENST00000569455 PLEK2Q9NYT0 353 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 LUZP4Q9P127 313 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 MALT1Q9UDY8 824 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 OR52A1Q9UKL2 312 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 FBXL3Q9UKT7 428 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 HHLA2Q9UM44 414 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 TIMM10BQ9Y5J6 103 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 SHANK1Q9Y566 2161 aa6.71□□□□□ -1.34
CDH13-214ENST00000569455 ESPL1Q14674 2120 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ZGRF1Q86YA3 2104 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 TRBV5-5A0A0J9YX44 114 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 IQCMA0A1B0GVH7 501 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CLEC18AA5D8T8 446 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 DOK2O60496 412 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 TMEM127O75204 238 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 SRSF10O75494 262 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 CNOT4O95628 575 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 WNT11O96014 354 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ISG15P05161 165 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CRHP06850 196 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ABOP16442 354 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ZNF32P17041 273 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CTSSP25774 331 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 MPGP29372 298 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CX3CR1P49238 355 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 PRKXP51817 358 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 PER3P56645 1201 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 TGFBR3Q03167 851 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 HNRNPA0Q13151 305 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 DYNC1I2Q13409 638 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 INSL4Q14641 139 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ODF4Q2M2E3 257 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CCDC92Q53HC0 331 aaPredicted RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 C1orf185Q5T7R7 199 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 TMEM53Q6P2H8 277 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 MZT2AQ6P582 158 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CLEC18BQ6UXF7 455 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ZNF627Q7L945 461 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 LUZP2Q86TE4 346 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ELMOD2Q8IZ81 293 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CLEC18CQ8NCF0 446 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 GALNT11Q8NCW6 608 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 IL17RDQ8NFM7 739 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 OR6Q1Q8NGQ2 317 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 OR6K3Q8NGY3 331 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 OR1F12Q8NHA8 337 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 FAM57AQ8TBR7 257 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 NANOS1Q8WY41 292 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 RGP1Q92546 391 aaPredicted RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 SNRNP40Q96DI7 357 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 FBXO17Q96EF6 278 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CEP19Q96LK0 163 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 ZFP3Q96NJ6 502 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 DERL3Q96Q80 235 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 SH3GL3Q99963 347 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 SLX1AQ9BQ83 275 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 WDR12Q9GZL7 423 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 PBOV1Q9GZY1 135 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 RNF121Q9H920 327 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 TCF7L1Q9HCS4 588 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 HMG20AQ9NP66 347 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 PNRC2Q9NPJ4 139 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 G6PC2Q9NQR9 355 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 FAM206AQ9NX38 181 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 CKLFQ9UBR5 152 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 NUFIP1Q9UHK0 495 aaKnown RBP6.7□□□□□ -1.34
CDH13-214ENST00000569455 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 SLC22A13Q9Y226 551 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 SLC5A6Q9Y289 635 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 PMF1-BGLAPU3KQ54 211 aa6.7□□□□□ -1.34
CDH13-214ENST00000569455 UTP20O75691 2785 aaKnown RBP6.69□□□□□ -1.34
CDH13-214ENST00000569455 A0A1B0GVI7 797 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 LOC107986453A0A1B0GWG9 222 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 MBD3L4A6NDZ8 208 aaPredicted RBP6.69□□□□□ -1.34
CDH13-214ENST00000569455 MBD3L3A6NE82 208 aaPredicted RBP6.69□□□□□ -1.34
CDH13-214ENST00000569455 OR6C6A6NF89 314 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
CDH13-214ENST00000569455 CLDN25C9JDP6 229 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 PRRG2O14669 202 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 ANXA2P07355 339 aaKnown RBP6.69□□□□□ -1.34
CDH13-214ENST00000569455 CLEC2LP0C7M8 214 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 ZNF12P17014 697 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 SRMP19623 302 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 RAB3BP20337 219 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 ARR3P36575 388 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 SLC6A9P48067 706 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 SOX2P48431 317 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 PSMD7P51665 324 aa6.69□□□□□ -1.34
CDH13-214ENST00000569455 TPTEP56180 551 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms