RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 HINT3Q9NQE9 182 aaKnown RBP7.88□□□□□ -1.15
CAPN3-219ENST00000569136 CYSLTR2Q9NS75 346 aa7.88□□□□□ -1.15
CAPN3-219ENST00000569136 PLEK2Q9NYT0 353 aa7.88□□□□□ -1.15
CAPN3-219ENST00000569136 AP4S1Q9Y587 144 aa7.88□□□□□ -1.15
CAPN3-219ENST00000569136 NIPBLQ6KC79 2804 aaeCLIP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 NAV3Q8IVL0 2385 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 IGLV3-9A0A075B6K5 115 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 IGLV1-36A0A0B4J1U3 117 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 OR6C6A6NF89 314 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 EBAG9O00559 213 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 GPRIN2O60269 458 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 NDUFS7O75251 213 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 IGHV3-13P01766 116 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 HLA-DQA2P01906 255 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 FASP25445 335 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 FMO3P31513 532 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TMEM33P57088 247 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 HIST1H3AP68431 136 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 PPP1R8Q12972 351 aaKnown RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 PCGF3Q3KNV8 242 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 HIST2H3PS2Q5TEC6 136 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 SHQ1Q6PI26 577 aaKnown RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 UGT2A3Q6UWM9 527 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 CLEC9AQ6UXN8 241 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 HIST2H3AQ71DI3 136 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 HIPK1Q86Z02 1210 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 ZNF786Q8N393 782 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 PAQR4Q8N4S7 273 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 PROKR2Q8NFJ6 384 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 SLC26A10Q8NG04 563 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 SNX33Q8WV41 574 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 PTP4A1Q93096 173 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 DUS3LQ96G46 650 aaKnown RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TSSK2Q96PF2 358 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 RPRD1BQ9NQG5 326 aaKnown RBP7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TBC1D23Q9NUY8 699 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 VNN3Q9NY84 501 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 NKIRAS2Q9NYR9 191 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 TAAR3PQ9P1P4 343 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 POLR1DQ9Y2S0 133 aa7.87□□□□□ -1.15
CAPN3-219ENST00000569136 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 A0A1W2PPW3 197 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 H3BN98 237 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 DCTN6O00399 190 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 MPZL1O95297 269 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ABHD16AO95870 558 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 TFP02787 698 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 OSMP13725 252 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ZNF3P17036 446 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 PAICSP22234 425 aaKnown RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 USF1P22415 310 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 GRK5P34947 590 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 HTR5AP47898 357 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 RIPPLY3P57055 190 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 PPP1CBP62140 327 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 LOXL1Q08397 574 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ATP6AP1Q15904 470 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 CCDC92Q53HC0 331 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ZMAT1Q5H9K5 638 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 TEX30Q5JUR7 227 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ELFN2Q5R3F8 820 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 SLC27A4Q6P1M0 643 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ATG16L2Q8NAA4 619 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 OR1J1Q8NGS3 322 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 OR5K1Q8NHB7 308 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 KLF14Q8TD94 323 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 C10orf105Q8TEF2 133 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 SLCO4A1Q96BD0 722 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 MARS2Q96GW9 593 aaKnown RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 FOXN4Q96NZ1 517 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 SORCS2Q96PQ0 1159 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 COQ7Q99807 217 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 NIPSNAP1Q9BPW8 284 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 SYT3Q9BQG1 590 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 RBM4Q9BWF3 364 aaKnown RBP7.86□□□□□ -1.15
CAPN3-219ENST00000569136 OSBPL10Q9BXB5 764 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 PLA2G12AQ9BZM1 189 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 HDHD2Q9H0R4 259 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 CMC2Q9NRP2 79 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 CYB5R1Q9UHQ9 305 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 GRIP1Q9Y3R0 1128 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 JMJD1CQ15652 2540 aa7.86□□□□□ -1.15
CAPN3-219ENST00000569136 ABCA1O95477 2261 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 PLSCR5A0PG75 271 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 C17orf100A8MU93 164 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 G3V2T6 193 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 RER1O15258 196 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 DOK2O60496 412 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 LY6G6DO95868 133 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 HEXAP06865 529 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 GAAP10253 952 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 DAOP14920 347 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 PRKACGP22612 351 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 GIFP27352 417 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 POU1F1P28069 291 aa7.85□□□□□ -1.15
CAPN3-219ENST00000569136 GGT2P36268 569 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms