RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CLPXO76031 633 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 IFNW1P05000 195 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 CTLA4P16410 223 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 FPR3P25089 353 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 SRSF4Q08170 494 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 KCNMB1Q16558 191 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 LRRC23Q53EV4 343 aaPredicted RBP13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 CCDC92Q53HC0 331 aaPredicted RBP13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 MBOAT2Q6ZWT7 520 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 MICU2Q8IYU8 434 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 SLC7A6Q92536 515 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 TPD52L3Q96J77 140 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 Q96M85 177 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF583Q96ND8 569 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 PKP2Q99959 881 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 NMNAT1Q9HAN9 279 aaPredicted RBP13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ACOXLQ9NUZ1 547 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ERVK-18Q9QC07 812 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF281Q9Y2X9 895 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
HERPUD1-215ENST00000568676 FAM220BPB1ANY3 271 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 H0YL77 283 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 NDUFA2O43678 99 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 SLC16A7O60669 478 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 TOX4O94842 621 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 SDHAP31040 664 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 CFHR2P36980 270 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 HIST1H3AP68431 136 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 HIST2H3PS2Q5TEC6 136 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 ASPHD2Q6ICH7 369 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 ZNF730Q6ZMV8 503 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 HIST2H3AQ71DI3 136 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 OR13C2Q8NGS9 318 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 PCGF1Q9BSM1 259 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 SLC22A4Q9H015 551 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 SYT4Q9H2B2 425 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 TNFRSF19Q9NS68 423 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 POLR1DQ9Y2S0 133 aa13.09□□□□□ -0.31
HERPUD1-215ENST00000568676 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 C22orf46C9J442 243 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 FXYD1O00168 92 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 RER1O15258 196 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 DBHP09172 617 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 PMELP40967 661 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 CD200P41217 278 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 KRR1Q13601 381 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 METTL11BQ5VVY1 283 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 GDPGP1Q6ZNW5 385 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 LDLRAD3Q86YD5 345 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 PLPP7Q8NBV4 271 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 BHLHE23Q8NDY6 225 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 OR2T12Q8NG77 320 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 LRTOMTQ8WZ04 291 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 WDFY2Q96P53 400 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 INTS9Q9NV88 658 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 COA3Q9Y2R0 106 aaPredicted RBP13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 AP3M1Q9Y2T2 418 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 NOTCH1P46531 2555 aa13.08□□□□□ -0.32
HERPUD1-215ENST00000568676 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 A0A087WUU8 490 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 CDC42EP2O14613 210 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 NDUFB2O95178 105 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 MMP9P14780 707 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 CRABP1P29762 137 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 RAD23AP54725 363 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 PROK1P58294 105 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 ECH1Q13011 328 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 MALLQ13021 153 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 MAB21L1Q13394 359 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 FAM201AQ5SY85 155 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 LYPD2Q6UXB3 125 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 ATP6V1G3Q96LB4 118 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 DPAGT1Q9H3H5 408 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 NRIP3Q9NQ35 241 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 GID8Q9NWU2 228 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 RNF7Q9UBF6 113 aa13.07□□□□□ -0.32
HERPUD1-215ENST00000568676 IGHV1-69DA0A0B4J2H0 117 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 MRASO14807 208 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 GPR137BO60478 399 aa13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-215ENST00000568676 IGHV1-69P01742 117 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms