RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 SONP18583 2426 aaKnown RBP16.9■□□□□ 0.3
CMTM3-211ENST00000565922 DYSFO75923 2080 aa16.9■□□□□ 0.3
CMTM3-211ENST00000565922 TVP23AA6NH52 213 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 CLDN25C9JDP6 229 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 F5H5K5 113 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 SURF4O15260 269 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 LMX1BO60663 402 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 CIB2O75838 187 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 HMGN1P05114 100 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 ERFP50548 548 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 TRIP10Q15642 601 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 KRTAP27-1Q3LI81 207 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 CHRFAM7AQ494W8 412 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 TEX30Q5JUR7 227 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 SLCO4A1Q96BD0 722 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 MAP6Q96JE9 813 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 HCAR1Q9BXC0 346 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 C1QTNF5Q9BXJ0 243 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 POFUT1Q9H488 388 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 MSL2Q9HCI7 577 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 PNRC2Q9NPJ4 139 aaKnown RBP16.89■□□□□ 0.29
CMTM3-211ENST00000565922 DDX28Q9NUL7 540 aaKnown RBP16.89■□□□□ 0.29
CMTM3-211ENST00000565922 PTTG3PQ9NZH4 202 aa16.89■□□□□ 0.29
CMTM3-211ENST00000565922 M0R135 149 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 TIPRLO75663 272 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 GYPBP06028 91 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 SPARCP09486 303 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 ACSM4P0C7M7 580 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 FCGR1AP12314 374 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 SELEP16581 610 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 TNFRSF1AP19438 455 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 TNFAIP6P98066 277 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-211ENST00000565922 DBPQ10586 325 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-211ENST00000565922 MALLQ13021 153 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 CDK5R2Q13319 367 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 GINS1Q14691 196 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 PCK2Q16822 640 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 COLCA1Q6ZS62 124 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 HS3ST5Q8IZT8 346 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 IQCF1Q8N6M8 205 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 LINC01356Q8N9X3 169 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 OTULINQ96BN8 352 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 ZNF799Q96GE5 643 aa16.88■□□□□ 0.29
CMTM3-211ENST00000565922 ABCA2Q9BZC7 2435 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 PRR23D1E9PI22 279 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-211ENST00000565922 TGFAP01135 160 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 LCATP04180 440 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 PRR23D2P0DMB1 279 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-211ENST00000565922 DCXRQ7Z4W1 244 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 PEG10Q86TG7 708 aaKnown RBP16.87■□□□□ 0.29
CMTM3-211ENST00000565922 OR5K1Q8NHB7 308 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 ZNRF4Q8WWF5 429 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 RAB1CQ92928 201 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 PLEKHA8Q96JA3 519 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 ZNF582Q96NG8 517 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-211ENST00000565922 WDR76Q9H967 626 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 PAPOLBQ9NRJ5 636 aaKnown RBP16.87■□□□□ 0.29
CMTM3-211ENST00000565922 IL19Q9UHD0 177 aa16.87■□□□□ 0.29
CMTM3-211ENST00000565922 ZNF878C9JN71 531 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 ZNF593O00488 134 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-211ENST00000565922 GLCEO94923 617 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 CLUP10909 449 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 HNF1AP20823 631 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 PCMT1P22061 227 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 PRKACGP22612 351 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 FASP25445 335 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 RPS27P42677 84 aaKnown RBP16.86■□□□□ 0.29
CMTM3-211ENST00000565922 SLC15A1P46059 708 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 SLC6A9P48067 706 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 CDK5Q00535 292 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 CCNIQ14094 377 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 TAF13Q15543 124 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 ATP6AP1Q15904 470 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 RSPO1Q2MKA7 263 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-211ENST00000565922 DRAM2Q6UX65 266 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 ZNF511Q8NB15 262 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 OR8G5Q8NG78 346 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 OR2Z1Q8NG97 314 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 OR13G1Q8NGZ3 307 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 CLDND2Q8NHS1 167 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 CCL17Q92583 94 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 UTP4Q969X6 686 aaKnown RBP16.86■□□□□ 0.29
CMTM3-211ENST00000565922 DUS3LQ96G46 650 aaKnown RBP16.86■□□□□ 0.29
CMTM3-211ENST00000565922 C1orf159Q96HA4 380 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 INTS14Q96SY0 518 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 COPS4Q9BT78 406 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 PRRG3Q9BZD7 231 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 SHARPINQ9H0F6 387 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 NTN4Q9HB63 628 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 SLC25A19Q9HC21 320 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 AP4S1Q9Y587 144 aa16.86■□□□□ 0.29
CMTM3-211ENST00000565922 FAM183AA6NL82 134 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 IQCF6A8MYZ5 107 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 B4DSR2 109 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 PRODHO43272 600 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 GSTT1P30711 240 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 OTX1P32242 354 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-211ENST00000565922 CDH15P55291 814 aa16.85■□□□□ 0.29
CMTM3-211ENST00000565922 HLXQ14774 488 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-211ENST00000565922 LINC01590Q5TEZ4 76 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms