RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ZHX1-C8orf76Q96EF9 292 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 MUS81Q96NY9 551 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 GPX7Q96SL4 187 aaPredicted RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 SH3GL3Q99963 347 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 RBM4BQ9BQ04 359 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 TACO1Q9BSH4 297 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 C9orf16Q9BUW7 83 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 RBM4Q9BWF3 364 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 SF3B5Q9BWJ5 86 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 C1orf43Q9BWL3 253 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 NMNAT2Q9BZQ4 307 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 RERGLQ9H628 205 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 SEC61A2Q9H9S3 476 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 NOX3Q9HBY0 568 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 CRLF2Q9HC73 371 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 AMBNQ9NP70 447 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 HINT3Q9NQE9 182 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 TBC1D23Q9NUY8 699 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 GLTPQ9NZD2 209 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 ZNF224Q9NZL3 707 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 LPAR3Q9UBY5 353 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 NDRG4Q9ULP0 352 aaKnown RBP5.31□□□□□ -1.56
UBFD1-204ENST00000565634 B9D1Q9UPM9 204 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 POFUT2Q9Y2G5 429 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 NOX1Q9Y5S8 564 aa5.31□□□□□ -1.56
UBFD1-204ENST00000565634 RYR3Q15413 4870 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 IGLV1-36A0A0B4J1U3 117 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 LOC100130705A0A1B0GUX0 176 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 A0A1W2PRG6 482 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PRSS37A4D1T9 235 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 C5orf63A6NC05 138 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CCDC182A6NF36 153 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZNF726A6NNF4 738 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PRR32B1ATL7 298 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ARPC3O15145 178 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SLC16A7O60669 478 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 WBP4O75554 376 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 VAMP5O95183 116 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CD8AP01732 235 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 IGHMP01871 453 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 GSTM3P21266 225 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZFP36P26651 326 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 GTF2E2P29084 291 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SLC6A6P31641 620 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 GGT2P36268 569 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 UGT2B10P36537 528 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 IFNGR2P38484 337 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CD79BP40259 229 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ARHGDIAP52565 204 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PRPS1P60891 318 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ROR2Q01974 943 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PIGFQ07326 219 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KRR1Q13601 381 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 GABRA6Q16445 453 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SGCAQ16586 387 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 RSPO1Q2MKA7 263 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 LINC01590Q5TEZ4 76 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 AADACL4Q5VUY2 407 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 FBXW9Q5XUX1 488 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PLBD1Q6P4A8 553 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CORO6Q6QEF8 472 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SKA3Q8IX90 412 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ENTHD1Q8IYW4 607 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 BCL6BQ8N143 479 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 UBE2J2Q8N2K1 259 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PARP8Q8N3A8 854 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZNF525Q8N782 197 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZNF611Q8N823 705 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 RHOXF1Q8NHV9 184 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CNIH3Q8TBE1 160 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 APH1BQ8WW43 257 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CYGBQ8WWM9 190 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 TFAP2CQ92754 450 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 TAF15Q92804 592 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 NABP1Q96AH0 204 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 TMEM45BQ96B21 275 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 OTULINQ96BN8 352 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 MSI2Q96DH6 328 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SLC25A44Q96H78 314 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ALKBH3Q96Q83 286 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 GABARAPL3Q9BY60 117 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SYT4Q9H2B2 425 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 ZNF556Q9HAH1 456 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 SLC25A19Q9HC21 320 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 RPRD1BQ9NQG5 326 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 MRPL22Q9NWU5 206 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 PAQR5Q9NXK6 330 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 UBAP1Q9NZ09 502 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 DNAJC27Q9NZQ0 273 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 VSX1Q9NZR4 365 aaPredicted RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KIF17Q9P2E2 1029 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KLHL9Q9P2J3 617 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KCNS2Q9ULS6 477 aa5.3□□□□□ -1.56
UBFD1-204ENST00000565634 KMT2CQ8NEZ4 4911 aaKnown RBP5.3□□□□□ -1.56
UBFD1-204ENST00000565634 CMYA5Q8N3K9 4069 aa5.29□□□□□ -1.56
UBFD1-204ENST00000565634 HTR3EA5X5Y0 456 aa5.29□□□□□ -1.56
UBFD1-204ENST00000565634 C16orf97H3BN30 126 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms