RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RAB1CQ92928 201 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 CDADC1Q9BWV3 514 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 FAM53CQ9NYF3 392 aa16.9■□□□□ 0.3
SHCBP1-203ENST00000564272 IGHV2-5P01817 119 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 ACSM4P0C7M7 580 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 RAP2AP10114 183 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 PSKH1P11801 424 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 PCMT1P22061 227 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 TNFSF4P23510 183 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 LNX2Q8N448 690 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 OR10G2Q8NGC3 310 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 OR5L1Q8NGL2 311 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 OR2T4Q8NH00 348 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 SPATA3Q8NHX4 192 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 ITLN1Q8WWA0 313 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 TMEM158Q8WZ71 300 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 RAB39BQ96DA2 213 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 ATF6BQ99941 703 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 GAL3ST1Q99999 423 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 DGCR6LQ9BY27 220 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 WDR76Q9H967 626 aa16.89■□□□□ 0.29
SHCBP1-203ENST00000564272 F5H5K5 113 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 THBS2P35442 1172 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 PRSS12P56730 875 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 SLC3A1Q07837 685 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 TRAP1Q12931 704 aaKnown RBP16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 CRMP1Q14194 572 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 ACSM5Q6NUN0 579 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 OR10AD1Q8NGE0 317 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 OR10S1Q8NGN2 331 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 POP5Q969H6 163 aaKnown RBP16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 MAP6Q96JE9 813 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 NIPSNAP1Q9BPW8 284 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 CHID1Q9BWS9 393 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 TMEM106BQ9NUM4 274 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 KCNG2Q9UJ96 466 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 DYSFO75923 2080 aa16.88■□□□□ 0.29
SHCBP1-203ENST00000564272 GYPBP06028 91 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 ZNF823P16415 610 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 ECH1Q13011 328 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 KRTAP24-1Q3LI83 254 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 COLCA1Q6ZS62 124 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 NAA40Q86UY6 237 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 BHLHE23Q8NDY6 225 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 OR2T33Q8NG76 320 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 BCAS4Q8TDM0 211 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 OR2V2Q96R30 315 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 RBM4Q9BWF3 364 aaKnown RBP16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 C1QTNF5Q9BXJ0 243 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 UBAP1Q9NZ09 502 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 NPTNQ9Y639 398 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 COMMD3-BMI1R4GMX3 469 aa16.87■□□□□ 0.29
SHCBP1-203ENST00000564272 TRAV20A0A0B4J274 112 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 DHRS12A0PJE2 317 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 PLPP2O43688 288 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 CST1P01037 141 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 IGHV2-70P01814 119 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 TNFRSF1AP19438 455 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 PEG10Q86TG7 708 aaKnown RBP16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 ATG16L2Q8NAA4 619 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 OR8G5Q8NG78 346 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 CANT1Q8WVQ1 401 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 ZNF582Q96NG8 517 aaPredicted RBP16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 G6PC2Q9NQR9 355 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 IL19Q9UHD0 177 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 BAIAP2Q9UQB8 552 aa16.86■□□□□ 0.29
SHCBP1-203ENST00000564272 AQP12BA6NM10 295 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 IQCF6A8MYZ5 107 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 H0YL77 283 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 LCATP04180 440 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 SPARCP09486 303 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 CLUP10909 449 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 ANPEPP15144 967 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 FAHD2BQ6P2I3 314 aaPredicted RBP16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 TMEM179BQ7Z7N9 219 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 AQP12AQ8IXF9 295 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 IQCF1Q8N6M8 205 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 ZNF283Q8N7M2 679 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 ZNF511Q8NB15 262 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 GIPC3Q8TF64 312 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 FAHD2AQ96GK7 314 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 FEVQ99581 238 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 NMNAT2Q9BZQ4 307 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 PPP1R3CQ9UQK1 317 aa16.85■□□□□ 0.29
SHCBP1-203ENST00000564272 STAB1Q9NY15 2570 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 IGHV3-64DA0A0J9YX35 117 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 M0R135 149 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 SURF4O15260 269 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 GYG2O15488 501 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 MLNRO43193 412 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 PNPP00491 289 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 SBK2P0C263 348 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 SPI1P17947 270 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 ANOS1P23352 680 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 MMP16P51512 607 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 SLC25A1P53007 311 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 GK2Q14410 553 aaPredicted RBP16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
SHCBP1-203ENST00000564272 SHQ1Q6PI26 577 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms