RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MRM2Q9UI43 246 aaKnown RBP14.75□□□□□ -0.05
CMTM3-208ENST00000564247 AKAP9Q99996 3911 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 OR6C6A6NF89 314 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 TUBAL3A6NHL2 446 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 TRIM64CA6NLI5 447 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 SERPINA5P05154 406 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 COX5BP10606 129 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 DCTDP32321 178 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 APLNRP35414 380 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 OPRL1P41146 370 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 TPTEP56180 551 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 PPA1Q15181 289 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 NEDD8Q15843 81 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF684Q5T5D7 378 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF367Q7RTV3 350 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 OR1J2Q8NGS2 313 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 KCNJ15Q99712 375 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 PNRC2Q9NPJ4 139 aaKnown RBP14.74□□□□□ -0.05
CMTM3-208ENST00000564247 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
CMTM3-208ENST00000564247 ATPIF1Q9UII2 106 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 LRP12Q9Y561 859 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 SLC25A15Q9Y619 301 aa14.74□□□□□ -0.05
CMTM3-208ENST00000564247 FAM221AA4D161 298 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 SYNGR3O43761 229 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 CTAG2O75638 210 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 RPP14O95059 124 aaKnown RBP14.73□□□□□ -0.05
CMTM3-208ENST00000564247 SMIM18P0DKX4 95 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 PCMT1P22061 227 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 STOMP27105 288 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 GDI2P50395 445 aaKnown RBP14.73□□□□□ -0.05
CMTM3-208ENST00000564247 GALK2Q01415 458 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 RAB39AQ14964 217 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF829Q3KNS6 432 aaPredicted RBP14.73□□□□□ -0.05
CMTM3-208ENST00000564247 LIPNQ5VXI9 398 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 ALKBH2Q6NS38 261 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 TMEM200AQ86VY9 491 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 KLBQ86Z14 1044 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF283Q8N7M2 679 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 FAM169BQ8N8A8 192 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 OR10S1Q8NGN2 331 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 C1QTNF6Q9BXI9 259 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 SP140LQ9H930 580 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 NGBQ9NPG2 151 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 TRIM36Q9NQ86 728 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 HRNRQ86YZ3 2850 aaPredicted RBP14.73□□□□□ -0.05
CMTM3-208ENST00000564247 RTTNQ86VV8 2226 aa14.73□□□□□ -0.05
CMTM3-208ENST00000564247 SPG11Q96JI7 2443 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF503-AS2A6NEH8 195 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 PRR32B1ATL7 298 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 F5H5K5 113 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 LCKP06239 509 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 HSMCR30P0CW71 290 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 EPXP11678 715 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 PRKXP51817 358 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 NR1H2P55055 460 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 TAS2R43P59537 309 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 DAZAP2Q15038 168 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-208ENST00000564247 TAB1Q15750 504 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 UBE2UQ5VVX9 321 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 CPEB3Q8NE35 698 aaKnown RBP14.72□□□□□ -0.05
CMTM3-208ENST00000564247 OR5M11Q96RB7 305 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 MGLLQ99685 303 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 MED18Q9BUE0 208 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 NOX3Q9HBY0 568 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 ISYNA1Q9NPH2 558 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 ACOXLQ9NUZ1 547 aa14.72□□□□□ -0.05
CMTM3-208ENST00000564247 LSM2Q9Y333 95 aaKnown RBP14.72□□□□□ -0.05
CMTM3-208ENST00000564247 TMEM269A0A1B0GVZ9 245 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 ACOD1A6NK06 481 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 ABHD16AO95870 558 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 JUNBP17275 347 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-208ENST00000564247 CCNOP22674 350 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 APEX1P27695 318 aaKnown RBP14.71□□□□□ -0.05
CMTM3-208ENST00000564247 PSMB9P28065 219 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 IDH3GP51553 393 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-208ENST00000564247 BDH1Q02338 343 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 ACSM1Q08AH1 577 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 TIGD6Q17RP2 521 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 TBC1D28Q2M2D7 210 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 CCDC58Q4VC31 144 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 ARL9Q6T311 187 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF485Q8NCK3 441 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 SLC30A7Q8NEW0 376 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 IL17RDQ8NFM7 739 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 LINC01560Q8TB33 94 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 PELI1Q96FA3 418 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 COG8Q96MW5 612 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 DCLRE1CQ96SD1 692 aaKnown RBP14.71□□□□□ -0.05
CMTM3-208ENST00000564247 GTF2A1LQ9UNN4 478 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 R4GMQ9 66 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 CCDC168Q8NDH2 2452 aa14.71□□□□□ -0.05
CMTM3-208ENST00000564247 C5orf49A4QMS7 147 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 A6NNC1 897 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 M0R135 149 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 INMTO95050 263 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 IGKV3-15P01624 115 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 ZNF14P17017 642 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-208ENST00000564247 PSMB10P40306 273 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 SLC6A9P48067 706 aa14.7□□□□□ -0.06
CMTM3-208ENST00000564247 TGM4P49221 684 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms