RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FAM219BQ5XKK7 198 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TTC19Q6DKK2 380 aaPredicted RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ASPHD2Q6ICH7 369 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 C3P1Q6ZMU1 363 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ASRGL1Q7L266 308 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 COMMD6Q7Z4G1 85 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 C5orf24Q7Z6I8 188 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 C10orf107Q8IVU9 208 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SPAG16Q8N0X2 631 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 APCDD1LQ8NCL9 501 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 BHLHE23Q8NDY6 225 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 B3GNT7Q8NFL0 401 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 C8orf46Q8TAG6 207 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 C11orf45Q8TAV5 145 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TRMT10AQ8TBZ6 339 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 TCP10LQ8TDR4 215 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SLC25A36Q96CQ1 311 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 KCNA7Q96RP8 456 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 NPAS2Q99743 824 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 IQCGQ9H095 443 aaKnown RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 AHSPQ9NZD4 102 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 SLC17A7Q9P2U7 560 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 VPS29Q9UBQ0 182 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ZNF223Q9UK11 482 aaPredicted RBP3.91□□□□□ -1.78
LINC00254-201ENST00000563416 ICE1Q9Y2F5 2266 aa3.91□□□□□ -1.78
LINC00254-201ENST00000563416 DOPEY1Q5JWR5 2465 aa3.9□□□□□ -1.78
LINC00254-201ENST00000563416 INTS1Q8N201 2190 aaKnown RBP3.9□□□□□ -1.78
LINC00254-201ENST00000563416 USP9YO00507 2555 aaPredicted RBP3.9□□□□□ -1.78
LINC00254-201ENST00000563416 IGHV4-30-2A0A087WSY4 118 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 A0A087WZ39 114 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 NPIPB9F8W1W9 429 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 H3BTX0 84 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TM9SF1O15321 606 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 RGS16O15492 202 aaPredicted RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 SAP30O75446 220 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CIB2O75838 187 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MYO1DO94832 1006 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 GPR75O95800 540 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MT-ND1P03886 318 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 IGKV3-11P04433 115 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 KLK1P06870 262 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 BPGMP07738 259 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 FGF4P08620 206 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 GLRA1P23415 457 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 HMOX2P30519 316 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 SERPINB5P36952 375 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 PPT1P50897 306 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 SLC18A1P54219 525 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 STX4Q12846 297 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 KIAA0040Q15053 153 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 DUSP5Q16690 384 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 EXOC3L2Q2M3D2 409 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 FAM106AQ4KMX7 169 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 SPIN4Q56A73 249 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 OR52E8Q6IFG1 317 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 DGAT2L6Q6ZPD8 337 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 PAGE2Q7Z2X7 111 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 LHFPL4Q7Z7J7 247 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CRLF3Q8IUI8 442 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 ST13P4Q8IZP2 240 aaPredicted RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 KIF2BQ8N4N8 673 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 ZADH2Q8N4Q0 377 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CCNYL1Q8N7R7 359 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MORN4Q8NDC4 146 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MDS2Q8NDY4 140 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 C17orf47Q8NEP4 570 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 OR8K3Q8NH51 312 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 PNPT1Q8TCS8 783 aaKnown RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF721Q8TF20 911 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 OSTF1Q92882 214 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 UCN3Q969E3 161 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TLCD1Q96CP7 247 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 FCRL1Q96LA6 429 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 VSTM2LQ96N03 204 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 NEDD4LQ96PU5 975 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 HBEGFQ99075 208 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 PELOQ9BRX2 385 aaKnown RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 SHCBP1LQ9BZQ2 653 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 PARLQ9H300 379 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TUBB1Q9H4B7 451 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 RPF2Q9H7B2 306 aaKnown RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TRIM45Q9H8W5 580 aaPredicted RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CALHM2Q9HA72 323 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 WDR41Q9HAD4 459 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 KCNK13Q9HB14 408 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 RRAGDQ9NQL2 400 aaPredicted RBP3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MED17Q9NVC6 651 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CES1P1Q9UKY3 287 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CLEC4AQ9UMR7 237 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 ZNF175Q9Y473 711 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TIMM22Q9Y584 194 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 MED12Q93074 2177 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 CRYBG3Q68DQ2 2970 aa3.9□□□□□ -1.79
LINC00254-201ENST00000563416 TRAV17A0A0B4J275 112 aa3.89□□□□□ -1.79
LINC00254-201ENST00000563416 TRBV11-1A0A0K0K1C0 115 aa3.89□□□□□ -1.79
LINC00254-201ENST00000563416 A0A1W2PPR1 153 aa3.89□□□□□ -1.79
LINC00254-201ENST00000563416 OR5H15A6NDH6 313 aa3.89□□□□□ -1.79
LINC00254-201ENST00000563416 SRRM4A7MD48 611 aaKnown RBP3.89□□□□□ -1.79
LINC00254-201ENST00000563416 GABRR3A8MPY1 467 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms