RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PITX2Q99697 317 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 ATF6BQ99941 703 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 TRIM15Q9C019 465 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 PNRC2Q9NPJ4 139 aaKnown RBP14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 G6PC2Q9NQR9 355 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 TMEM106BQ9NUM4 274 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 CYB5R1Q9UHQ9 305 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 SAMHD1Q9Y3Z3 626 aaKnown RBP14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 NPTNQ9Y639 398 aa14.53□□□□□ -0.08
CDC42BPB-208ENST00000561271 F5H5K5 113 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 GASTP01350 101 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 IGHV2-70P01814 119 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 PSKH1P11801 424 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 TNFRSF1AP19438 455 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 TRIM25Q14258 630 aaKnown RBP14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 RSPO1Q2MKA7 263 aaPredicted RBP14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 KRTAP27-1Q3LI81 207 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR2T5Q6IEZ7 315 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 RASSF6Q6ZTQ3 369 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 LINC00471Q8N535 108 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 RFLNBQ8N5W9 214 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR51L1Q8NGJ5 315 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR9Q1Q8NGQ5 310 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR2T29Q8NH02 315 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNRF4Q8WWF5 429 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 MAP6Q96JE9 813 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 REEP1Q9H902 201 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 IL20Q9NYY1 176 aa14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 PRPF19Q9UMS4 504 aaKnown RBP14.52□□□□□ -0.09
CDC42BPB-208ENST00000561271 LOC105371242A0A075B767 164 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 A0A0G2JMP0 313 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 A0A0X1KG70 313 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 TVP23AA6NH52 213 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 TCF21O43680 179 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 AVPP01185 164 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 ACSM4P0C7M7 580 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 ANPEPP15144 967 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 MMP16P51512 607 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 TRAP1Q12931 704 aaKnown RBP14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 FAM98BQ52LJ0 330 aaKnown RBP14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 C1orf229Q6ZS94 237 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNF283Q8N7M2 679 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 ATG16L2Q8NAA4 619 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 SLC37A3Q8NCC5 494 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR4M2Q8NGB6 313 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR10S1Q8NGN2 331 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR4Q3Q8NH05 313 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 SIGLEC11Q96RL6 698 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 DDOQ99489 341 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 CDADC1Q9BWV3 514 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 TSSK6Q9BXA6 273 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 ARMC1Q9NVT9 282 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 IL19Q9UHD0 177 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 METRNQ9UJH8 293 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 PPP1R3CQ9UQK1 317 aa14.51□□□□□ -0.09
CDC42BPB-208ENST00000561271 IGHV3-64DA0A0J9YX35 117 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 H0YL77 283 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 DYNC1I1O14576 645 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 SURF4O15260 269 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 MLNRO43193 412 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 RGS9O75916 674 aaPredicted RBP14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 GYPBP06028 91 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 SBK2P0C263 348 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNF823P16415 610 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 LCN2P80188 198 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 ECH1Q13011 328 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 CRMP1Q14194 572 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 COLCA1Q6ZS62 124 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 NAA40Q86UY6 237 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR8G5Q8NG78 346 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR2T4Q8NH00 348 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 ASB9Q96DX5 294 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 C1QTNF5Q9BXJ0 243 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 TMPRSS13Q9BYE2 586 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 OCEL1Q9H607 264 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 KCNG2Q9UJ96 466 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 COMMD3-BMI1R4GMX3 469 aa14.5□□□□□ -0.09
CDC42BPB-208ENST00000561271 IQCF6A8MYZ5 107 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 LCATP04180 440 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ADRA2CP18825 462 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ANOS1P23352 680 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 SEC61A1P61619 476 aaKnown RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 BTG1P62324 171 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 GK2Q14410 553 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZMYND11Q15326 602 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 MICAQ29983 383 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNF362Q5T0B9 420 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 DCAF12L2Q5VW00 463 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 LIPNQ5VXI9 398 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 LNX2Q8N448 690 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR10G2Q8NGC3 310 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 OR13G1Q8NGZ3 307 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNF420Q8TAQ5 688 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ST7LQ8TDW4 575 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 MEGF10Q96KG7 1140 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 LRGUKQ96M69 825 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 ZNF582Q96NG8 517 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 RBM4Q9BWF3 364 aaKnown RBP14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 HCAR1Q9BXC0 346 aa14.49□□□□□ -0.09
CDC42BPB-208ENST00000561271 DGCR6LQ9BY27 220 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms