RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 LINC00346Q8IVM7 164 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 OR2T27Q8NH04 317 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 MBOAT4Q96T53 435 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 DOK1Q99704 481 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 ABHD6Q9BV23 337 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 LIME1Q9H400 295 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 MYOZ1Q9NP98 299 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-234ENST00000557703 CLN6Q9NWW5 311 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF391Q9UJN7 358 aa11.78□□□□□ -0.52
SHMT2-234ENST00000557703 M0R135 149 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 DLGAP1O14490 977 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 SBK2P0C263 348 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ACSM4P0C7M7 580 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 CCL2P13500 99 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 SELEP16581 610 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 CFL1P23528 166 aaKnown RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 OPRL1P41146 370 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 MTNR1AP48039 350 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ROM1Q03395 351 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 EGR3Q06889 387 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 MALLQ13021 153 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 FBXW12Q6X9E4 464 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 PAQR4Q8N4S7 273 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 BBS1Q8NFJ9 593 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ABHD4Q8TB40 342 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF799Q96GE5 643 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-234ENST00000557703 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 MROQ9BYG7 248 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 RAB1BQ9H0U4 201 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 CSMD2Q7Z408 3487 aa11.77□□□□□ -0.53
SHMT2-234ENST00000557703 MAP1AP78559 2803 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-234ENST00000557703 TMEM129A0AVI4 362 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 M0R233 179 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 GPRIN2O60269 458 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 GABRB1P18505 474 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 KITLGP21583 273 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 HSD11B1P28845 292 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 ATP6V1E1P36543 226 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 HSPA13P48723 471 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 DSCR9P59020 149 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 ACTC1P68032 377 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 ACTA1P68133 377 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 PCGF3Q3KNV8 242 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 KCTD20Q7Z5Y7 419 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF679Q8IYX0 411 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 KLF14Q8TD94 323 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-234ENST00000557703 THEM6Q8WUY1 208 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 SNX33Q8WV41 574 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-234ENST00000557703 NRGNQ92686 78 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 HAVCR1Q96D42 359 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 RGCCQ9H4X1 137 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 CENPMQ9NSP4 180 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
SHMT2-234ENST00000557703 NKIRAS2Q9NYR9 191 aa11.76□□□□□ -0.53
SHMT2-234ENST00000557703 RPL36Q9Y3U8 105 aaKnown RBP11.76□□□□□ -0.53
SHMT2-234ENST00000557703 CSMD1Q96PZ7 3565 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 PLSCR5A0PG75 271 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 IRGMA1A4Y4 181 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF670-ZNF695F2Z2N8 137 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 F5H5K5 113 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 XRCC2O43543 280 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 SULT1C4O75897 302 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ADH4P08319 380 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 CSF3P09919 207 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 DDOSTP39656 456 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 CAPGP40121 348 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 PTH2RP49190 550 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 EFNA4P52798 201 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 CSNK2BP67870 215 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ADARB1P78563 741 aaKnown RBP11.75□□□□□ -0.53
SHMT2-234ENST00000557703 SNCBQ16143 134 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ZNF691Q5VV52 312 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ENTHD1Q8IYW4 607 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 HAVCR2Q8TDQ0 301 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 ADI1Q9BV57 179 aa11.75□□□□□ -0.53
SHMT2-234ENST00000557703 CACNG6Q9BXT2 260 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms