RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CACNG3O60359 315 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 DEXIO95424 95 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 NSA2O95478 260 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 MBP02144 154 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 APOA1P02647 267 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 OR4Q2P0C623 313 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 P0C879 139 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 NPIPA8P0DM63 369 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CCNB1P14635 433 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 ZP3P21754 424 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 MMP11P24347 488 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 GABRR2P28476 465 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 UGT1A3P35503 534 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 NAMPTP43490 491 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 OR3A4PP47883 348 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 P2RY1P47900 373 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 GNG10P50151 68 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SERPINB9P50453 376 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 RAB13P51153 203 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 EFNA3P52797 238 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SUCLG1P53597 346 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PRRX1P54821 245 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CDH4P55283 916 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 AP1S1P61966 158 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 BCL2L1Q07817 233 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 TRIP13Q15645 432 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CHRNA6Q15825 494 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SLC25A52Q3SY17 297 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 AGBL2Q5U5Z8 902 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 LIPNQ5VXI9 398 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 FAM122BQ7Z309 247 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 LHFPL3Q86UP9 236 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 MFSD6LQ8IWD5 586 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CYP4Z2PQ8N1L4 340 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 DHRSXQ8N5I4 330 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 TTC29Q8NA56 475 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 FNDC5Q8NAU1 212 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SPATA4Q8NEY3 305 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 OR10A7Q8NGE5 316 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 OR4D5Q8NGN0 318 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 OR5H6Q8NGV6 325 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 HTR3CQ8WXA8 447 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PYDC1Q8WXC3 89 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PIGCQ92535 297 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 EMG1Q92979 244 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 TESCQ96BS2 214 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 C9orf72Q96LT7 481 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 TGM7Q96PF1 710 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 TRNT1Q96Q11 434 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CCNL2Q96S94 520 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 RNF126Q9BV68 326 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SLC19A3Q9BZV2 496 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 ZYG11BQ9C0D3 744 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 BLZF1Q9H2G9 400 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PPA2Q9H2U2 334 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 Q9H3A6 140 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PIGUQ9H490 435 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 SAV1Q9H4B6 383 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 LRRC40Q9H9A6 602 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 IFT46Q9NQC8 304 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 FGFR1OP2Q9NVK5 253 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 VNN3Q9NY84 501 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 B3GNT2Q9NY97 397 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PIPOXQ9P0Z9 390 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 RSL24D1Q9UHA3 163 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 DCDC2Q9UHG0 476 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 KLHL21Q9UJP4 597 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 STOML2Q9UJZ1 356 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CLEC4EQ9ULY5 219 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 CA5BQ9Y2D0 317 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 MEMO1Q9Y316 297 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 PPIL1Q9Y3C6 166 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 AK6Q9Y3D8 172 aaKnown RBP3.37□□□□□ -1.87
PRPF39-212ENST00000557477 ATRXP46100 2492 aa3.37□□□□□ -1.87
PRPF39-212ENST00000557477 GPR179Q6PRD1 2367 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 IGLV3-10A0A075B6K4 115 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SERTM2A0A1B0GWG4 89 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 PQLC2LA1A4F0 135 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 XKRY2A2RUG3 117 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 MYBPHLA2RUH7 354 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 C12orf71A8MTZ7 269 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SULT2B1O00204 365 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 WWP2O00308 870 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TAPBPO15533 448 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 PRKYO43930 277 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 SNNO75324 88 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OTCP00480 354 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TNNC2P02585 160 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 OR8U8P0C7N1 319 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 STAG3L3P0CL85 134 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TDGF1P13385 188 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 IGLL1P15814 213 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 KLK2P20151 261 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 WARSP23381 471 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 S100PP25815 95 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 G0S2P27469 103 aa3.36□□□□□ -1.87
PRPF39-212ENST00000557477 TAGLN2P37802 199 aaKnown RBP3.36□□□□□ -1.87
PRPF39-212ENST00000557477 CD79BP40259 229 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms