RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 SLX1AQ9BQ83 275 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 HCAR1Q9BXC0 346 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 SLC25A32Q9H2D1 315 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 TXNIPQ9H3M7 391 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 METTL17Q9H7H0 456 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-205ENST00000556622 RDH8Q9NYR8 311 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 LRIT1Q9P2V4 623 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 MGAT4CQ9UBM8 478 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 KCNN3Q9UGI6 736 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 HHLA2Q9UM44 414 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 NTNG1Q9Y2I2 539 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 SIRT4Q9Y6E7 314 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-205ENST00000556622 PTPRBP23467 1997 aa5.47□□□□□ -1.53
CPSF2-205ENST00000556622 URB1O60287 2271 aaKnown RBP5.46□□□□□ -1.53
CPSF2-205ENST00000556622 ACACBO00763 2458 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TRBV5-7A0A0A0MS05 114 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 LY6G6EA0A0G2JKS1 128 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 A0A1W2PPL8 197 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PRSS37A4D1T9 235 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR6C65A6NJZ3 312 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 F5H5P2 479 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ZNF593O00488 134 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ARPC1BO15143 372 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ZNF208O43345 1280 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 HCRTR2O43614 444 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TLX3O43711 291 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 DUX1O43812 170 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 CDC14BO60729 498 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 NUDT14O95848 222 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 MT-ND4P03905 459 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RLN1P04808 185 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 IFNA6P05013 189 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 GYPBP06028 91 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 CT62P0C5K7 136 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 UBBP0CG47 229 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PET100P0DJ07 73 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RPA2P15927 270 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ACHEP22303 614 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 MPZP25189 248 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 HTR2CP28335 458 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 CD1CP29017 333 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TACR3P29371 465 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 BTCP35070 178 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 AQP2P41181 271 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 CBX5P45973 191 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SRP9P49458 86 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SEC61A1P61619 476 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RPS11P62280 158 aaKnown RBP eCLIP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RPS27AP62979 156 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 UBA52P62987 128 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 CCL7P80098 99 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ZP4Q12836 540 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SKP2Q13309 424 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 GK2Q14410 553 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SLC17A1Q14916 467 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ST3GAL2Q16842 350 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PCGF3Q3KNV8 242 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 C14orf28Q4W4Y0 310 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 HES5Q5TA89 166 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SFRP4Q6FHJ7 346 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 LAMTOR1Q6IAA8 161 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TMEM65Q6PI78 240 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PGAP1Q75T13 922 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 FAM122BQ7Z309 247 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ADGRE4PQ86SQ3 457 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 NR2C2APQ86WQ0 139 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TMEM17Q86X19 198 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ARL14Q8N4G2 192 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 LSM14AQ8ND56 463 aaKnown RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR11G2Q8NGC1 345 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR11H7Q8NGC8 314 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR5T3Q8NGG3 340 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR5D14Q8NGL3 314 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR6N2Q8NGY6 317 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR4C3Q8NH37 302 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR52I2Q8NH67 350 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RNF128Q8TEB7 428 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 MCHR2Q969V1 340 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 ARSGQ96EG1 525 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RBP7Q96R05 134 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 VRK1Q99986 396 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PDCD1LG2Q9BQ51 273 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 UQCC2Q9BRT2 126 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 GINS4Q9BRT9 223 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 EXO5Q9H790 373 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 TMEM138Q9NPI0 162 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PLSCR3Q9NRY6 295 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 NKIRAS2Q9NYR9 191 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 PLA2G3Q9NZ20 509 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 VSX1Q9NZR4 365 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 GHRLQ9UBU3 117 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 OR5V1Q9UGF6 321 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SLC23A1Q9UHI7 598 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 RAB22AQ9UL26 194 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 U3KQA8 63 aa5.46□□□□□ -1.54
CPSF2-205ENST00000556622 COL5A1P20908 1838 aaPredicted RBP5.46□□□□□ -1.54
CPSF2-205ENST00000556622 KANTRA0A1W2PQU2 76 aa5.45□□□□□ -1.54
CPSF2-205ENST00000556622 A0A1W2PS29 197 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms