RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 OR14L1PQ8NHC6 308 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 OTOSQ8NHW6 89 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ADAMTS17Q8TE56 1095 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 THEM6Q8WUY1 208 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 PSMF1Q92530 271 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 GHSRQ92847 366 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 SMIM19Q96E16 107 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 GNRHR2Q96P88 292 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 FAM173AQ9BQD7 235 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 TTTY10Q9BZA0 68 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 TMEM185BQ9H7F4 350 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ANKRD10Q9NXR5 420 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 LRFN1Q9P244 771 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 KLHL9Q9P2J3 617 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 B4GALT7Q9UBV7 327 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ST6GALNAC2Q9UJ37 374 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 IKZF2Q9UKS7 526 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 CMAHPQ9Y471 501 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 SIRT4Q9Y6E7 314 aaPredicted RBP6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ZGRF1Q86YA3 2104 aa6.04□□□□□ -1.44
SLIRP-204ENST00000555890 ARPC4-TTLL3A0A0A6YYG9 625 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 A0A0A6YYJ9 748 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF879B4DU55 563 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 CTDSP2O14595 271 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 PDCD5O14737 125 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MAGEB4O15481 346 aaPredicted RBP6.03□□□□□ -1.44
SLIRP-204ENST00000555890 LRRTM2O43300 516 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 TRAPPC6AO75865 159 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 IGHG1P01857 330 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 SPARCP09486 303 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 OR8G3PP0DMU2 310 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 HLA-DOBP13765 273 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 CTLA4P16410 223 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 GDF1P27539 372 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 CALRP27797 417 aaKnown RBP6.03□□□□□ -1.44
SLIRP-204ENST00000555890 CD96P40200 585 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 PSMB10P40306 273 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ETV6P41212 452 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 CLRN1P58418 232 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 IKZF1Q13422 519 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 EIF2B1Q14232 305 aaKnown RBP6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF181Q2M3W8 571 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 RGS21Q2M5E4 152 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 YIF1BQ5BJH7 314 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 TEX30Q5JUR7 227 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 PDSS1Q5T2R2 415 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF684Q5T5D7 378 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 DDI2Q5TDH0 399 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MYO7BQ6PIF6 2116 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 RPTNQ6XPR3 784 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 TRILQ7L0X0 811 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 KRT77Q7Z794 578 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 GPAT4Q86UL3 456 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 GLB1L2Q8IW92 636 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 RFLNBQ8N5W9 214 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 SYT14Q8NB59 555 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 OR6X1Q8NH79 312 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ACOT12Q8WYK0 555 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 NSMAFQ92636 917 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 THRSPQ92748 146 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 PNPLA2Q96AD5 504 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MISP3Q96FF7 219 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 SLC25A44Q96H78 314 aaPredicted RBP6.03□□□□□ -1.44
SLIRP-204ENST00000555890 TXNDC15Q96J42 360 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 SFXN2Q96NB2 322 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 SLC30A2Q9BRI3 323 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MROQ9BYG7 248 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 BARHL1Q9BZE3 327 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 COMMD4Q9H0A8 199 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ZFP64Q9NPA5 681 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 ACOXLQ9NUZ1 547 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MED29Q9NX70 200 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 GRIP1Q9Y3R0 1128 aa6.03□□□□□ -1.44
SLIRP-204ENST00000555890 MRPS18BQ9Y676 258 aaKnown RBP6.03□□□□□ -1.44
SLIRP-204ENST00000555890 NCKAP5O14513 1909 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 TRAV1-2A0A0B4J238 106 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ISPDA4D126 451 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 NPIPA2E9PIF3 369 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 NPIPA3F8WFD2 350 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 KLRC4-KLRK1H3BQV0 150 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PSMD9O00233 223 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SLC19A2O60779 497 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ZG16O60844 167 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF254O75437 659 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 AQP8O94778 261 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 RPP14O95059 124 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MPIG6BO95866 241 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MAPK3P27361 379 aaPredicted RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 LAP3P28838 519 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SHC1P29353 583 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 TNFSF8P32971 234 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PTGS2P35354 604 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 GUCA1AP43080 201 aaPredicted RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 P2RY4P51582 365 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 RIDAP52758 137 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SOX8P57073 446 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 CARD18P57730 90 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms