RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ACTR6Q9GZN1 396 aa8.66□□□□□ -1.02
PSEN1-213ENST00000555386 ELOVL5Q9NYP7 299 aa8.66□□□□□ -1.02
PSEN1-213ENST00000555386 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
PSEN1-213ENST00000555386 RABL2AQ9UBK7 228 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-213ENST00000555386 RABL2BQ9UNT1 228 aa8.66□□□□□ -1.02
PSEN1-213ENST00000555386 IER3IP1Q9Y5U9 82 aa8.66□□□□□ -1.02
PSEN1-213ENST00000555386 SIRT4Q9Y6E7 314 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-213ENST00000555386 HMX3A6NHT5 357 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF587BE7ETH6 402 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 J3QLW9 94 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 SSX4O60224 188 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 GPRIN2O60269 458 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ARL6IP5O75915 188 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 KRT8P05787 483 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 MRPL3P09001 348 aaKnown RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF19P17023 458 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 IGHV1-2P23083 117 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 TALDO1P37837 337 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 DDOSTP39656 456 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 MAP2K3P46734 347 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 SLC25A1P53007 311 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 CAV3P56539 151 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 OR12D2P58182 307 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 CLRN1P58418 232 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ZP4Q12836 540 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 MRPL28Q13084 256 aaKnown RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 IL18Q14116 193 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ACKR1Q16570 336 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 PHYHD1Q5SRE7 291 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 Q6ZT83 130 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 SPATC1Q76KD6 591 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 LINGO2Q7L985 606 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 BHLHA15Q7RTS1 189 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 CEACAM19Q7Z692 300 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 SLC35F2Q8IXU6 374 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 GABRG1Q8N1C3 465 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 CYB561A3Q8NBI2 242 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 NPEPL1Q8NDH3 523 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 DUSP18Q8NEJ0 188 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 OR4K13Q8NH42 304 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ENKURQ8TC29 256 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 TMEM45BQ96B21 275 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 S100PBPQ96BU1 408 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 SMIM19Q96E16 107 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 NEDD4LQ96PU5 975 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 KCNJ15Q99712 375 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 C11orf54Q9H0W9 315 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 FANCFQ9NPI8 374 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 CYSLTR2Q9NS75 346 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 RBFOX1Q9NWB1 397 aaKnown RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ST6GALNAC2Q9UJ37 374 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 FOXD3Q9UJU5 478 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF346Q9UL40 294 aaKnown RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 MOKQ9UQ07 419 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ADAM18Q9Y3Q7 739 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 ASH1LQ9NR48 2969 aaKnown RBP8.65□□□□□ -1.02
PSEN1-213ENST00000555386 LRBAP50851 2863 aa8.65□□□□□ -1.02
PSEN1-213ENST00000555386 A0A096LPE4 126 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 MEIOCA2RUB1 952 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 FAM25AB3EWG3 89 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 FAM25CB3EWG5 89 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 FAM25GB3EWG6 89 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 E9PI62 339 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 H7C1C5 153 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 PLA2G10O15496 165 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 FZD7O75084 574 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 GLCEO94923 617 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TXNDC12O95881 172 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ITGA5P08648 1049 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CLUP10909 449 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 NPR2P20594 1047 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 APEX1P27695 318 aaKnown RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 HLA-DMAP28067 261 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CCKARP32238 428 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 PYCR1P32322 319 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ACVR1BP36896 505 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CSNK1A1P48729 337 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 DAP3P51398 398 aaKnown RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 LCN6P62502 163 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 CDK5R1Q15078 307 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TAB1Q15750 504 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 KCNJ8Q15842 424 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 ACSM3Q53FZ2 586 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SFRP5Q5T4F7 317 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 IDNKQ5T6J7 187 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 RSBN1Q5VWQ0 802 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SFXN4Q6P4A7 337 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 BAIAP2L2Q6UXY1 529 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 KCTD20Q7Z5Y7 419 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 DMRTC2Q8IXT2 367 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-213ENST00000555386 TMEM123Q8N131 208 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 SDR9C7Q8NEX9 313 aa8.64□□□□□ -1.03
PSEN1-213ENST00000555386 OR6F1Q8NGZ6 308 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms