RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PGA4P0DJD7 388 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 PGA3P0DJD8 388 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ERGP11308 486 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 SRMP19623 302 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 TCN2P20062 427 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 MAGP20916 626 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 USF1P22415 310 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 WARSP23381 471 aaKnown RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 LONP1P36776 959 aaKnown RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 TNFSF9P41273 254 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 GPR1P46091 355 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 UBE2NP61088 152 aaKnown RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ATP6V0D1P61421 351 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 IFT88Q13099 833 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 DNAJC3Q13217 504 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 TSC22D1Q15714 1073 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 BEX5Q5H9J7 111 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 KHDRBS2Q5VWX1 349 aaKnown RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ADNP2Q6IQ32 1131 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 Q6ZR03 302 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 HORMAD1Q86X24 394 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 RIMKLAQ8IXN7 391 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 MYOCDQ8IZQ8 938 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 VKORC1L1Q8N0U8 176 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 KIF2BQ8N4N8 673 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 COX18Q8N8Q8 333 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 C11orf72Q8NBR9 251 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 INO80EQ8NBZ0 244 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 OR10G2Q8NGC3 310 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 OR11H7Q8NGC8 314 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 PIFOQ8TCI5 191 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ABHD3Q8WU67 409 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 PIH1D2Q8WWB5 315 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 RAB1CQ92928 201 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 MRGPRFQ96AM1 343 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 RPEQ96AT9 228 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 PDXPQ96GD0 296 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 JSRP1Q96MG2 331 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 OPALINQ96PE5 141 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 TIMM17AQ99595 171 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 SDHCQ99643 169 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 VCXQ9H320 206 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 SAV1Q9H4B6 383 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 FBXO44Q9H4M3 255 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 RGCCQ9H4X1 137 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ZC4H2Q9NQZ6 224 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 CLN6Q9NWW5 311 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 CTSFQ9UBX1 484 aa1.94□□□□□ -2.1
SCFD1-213ENST00000554776 ZMAT5Q9UDW3 170 aaKnown RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 TSSC4Q9Y5U2 329 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-213ENST00000554776 PCDH11XQ9BZA7 1347 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ARPC4-TTLL3A0A0A6YYG9 625 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 IGHV5-10-1A0A0J9YXX1 117 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 A0A1W2PRD5 423 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SERPINE3A8MV23 424 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 H7C0C1 242 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SNAI2O43623 268 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RP2O75695 350 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SLC25A14O95258 325 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RETP07949 1114 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 PGA5P0DJD9 388 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 CD37P11049 281 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RAB3AP20336 220 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RAB4AP20338 218 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 GABRR2P28476 465 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 BMI1P35226 326 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SSTR5P35346 364 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 NDUFA8P51970 172 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 PSMD4P55036 377 aaKnown RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 DAOAP59103 153 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 TAS2R46P59540 309 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ARG2P78540 354 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 LCN2P80188 198 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ZNF33AQ06730 810 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ART3Q13508 389 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 QPRTQ15274 297 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RBMY1FQ15415 496 aaKnown RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 RPEL1Q2QD12 228 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ORMDL2Q53FV1 153 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 MRPL21Q7Z2W9 205 aaKnown RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 NKAIN4Q8IVV8 208 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 NOXO1Q8NFA2 376 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 PROKR2Q8NFJ6 384 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 OR6Q1Q8NGQ2 317 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 ISOC2Q96AB3 205 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 NTAN1Q96AB6 310 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 GALNT14Q96FL9 552 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SLC17A9Q9BYT1 436 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SLIRPQ9GZT3 109 aaKnown RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 CLSTN2Q9H4D0 955 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 LHX9Q9NQ69 397 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 PEF1Q9UBV8 284 aaKnown RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 OR12D3Q9UGF7 316 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 PSG11Q9UQ72 335 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 COMMD3-BMI1R4GMX3 469 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 CARMIL3Q8ND23 1372 aa1.93□□□□□ -2.1
SCFD1-213ENST00000554776 COL4A4P53420 1690 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-213ENST00000554776 COL22A1Q8NFW1 1626 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-213ENST00000554776 A0A0J9YXV3 536 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms