RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ALKBH3Q96Q83 286 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SNX18Q96RF0 628 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SMR3AQ99954 134 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 BARHL1Q9BZE3 327 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 ISG20L2Q9H9L3 353 aaKnown RBP10.84□□□□□ -0.67
SHMT2-214ENST00000554604 SMURF1Q9HCE7 757 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 MOKQ9UQ07 419 aa10.84□□□□□ -0.67
SHMT2-214ENST00000554604 ARFGEF3Q5TH69 2177 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 TEX13CA0A0J9YWL9 993 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 GABRPO00591 440 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
SHMT2-214ENST00000554604 RNF13O43567 381 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 PLPP2O43688 288 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 SLC43A1O75387 559 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 TFP02787 698 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 GYPBP06028 91 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 MRPL3P09001 348 aaKnown RBP10.83□□□□□ -0.68
SHMT2-214ENST00000554604 CDKN1AP38936 164 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
SHMT2-214ENST00000554604 SPOCK1Q08629 439 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 KRR1Q13601 381 aaKnown RBP10.83□□□□□ -0.68
SHMT2-214ENST00000554604 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 AGAP6Q5VW22 663 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 CLEC9AQ6UXN8 241 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-214ENST00000554604 CCDC190Q86UF4 302 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 UEVLDQ8IX04 471 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 SLC35F2Q8IXU6 374 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 GPR137CQ8N3F9 429 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 MINDY2Q8NBR6 621 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 WDFY2Q96P53 400 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 TBX5Q99593 518 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 SNTG1Q9NSN8 517 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 RCE1Q9Y256 329 aa10.83□□□□□ -0.68
SHMT2-214ENST00000554604 ABCA1O95477 2261 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 A0A1W2PQL4 384 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ISPDA4D126 451 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 SLC35F4A4IF30 521 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 OVOL3O00110 214 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 UPK3AO75631 287 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 RGS9O75916 674 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 IGHMP01871 453 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 CD1AP06126 327 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 CDKN2AP42771 156 aaKnown RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ETFDHQ16134 617 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF181Q2M3W8 571 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 CDONQ4KMG0 1287 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 DCDC5Q6ZRR9 648 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 Q71RC1 249 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 FBXL14Q8N1E6 418 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 CIARTQ8N365 385 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 SCAIQ8N9R8 606 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ADPRHL1Q8NDY3 354 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 OR1K1Q8NGR3 316 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 OR5J2Q8NH18 312 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 AP3S1Q92572 193 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ZMYND19Q96E35 227 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 COX4I2Q96KJ9 171 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 C4orf36Q96KX1 117 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 TSPAN32Q96QS1 320 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 DHRS9Q9BPW9 319 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 TRAF4Q9BUZ4 470 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-214ENST00000554604 TMED9Q9BVK6 235 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 MROQ9BYG7 248 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 KCNN2Q9H2S1 579 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 OBP2BQ9NPH6 170 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 TBCCD1Q9NVR7 557 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 B3GAT1Q9P2W7 334 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 UGT2A1Q9Y4X1 527 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 ATP23Q9Y6H3 246 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 RTTNQ86VV8 2226 aa10.82□□□□□ -0.68
SHMT2-214ENST00000554604 JMJD1CQ15652 2540 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 A0A096LPE4 126 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 LOC102725191A0A1B0GVB3 256 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 A0A1W2PPZ6 126 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 E7EQL1 145 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 OGG1O15527 345 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 FZD7O75084 574 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 UPK1BO75841 260 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF432O94892 652 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 OR6A2O95222 327 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 RENP00797 406 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 F13BP05160 661 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 CFL1P23528 166 aaKnown RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 SDC2P34741 201 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 FABP6P51161 128 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 IFITM3Q01628 133 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 POU3F1Q03052 451 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 PUDPQ08623 228 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 HNRNPA0Q13151 305 aaKnown RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 CLEC12BQ2HXU8 276 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms