RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DOPEY2Q9Y3R5 2298 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATMQ13315 3056 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CROCCQ5TZA2 2017 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 AHCTF1Q8WYP5 2266 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IGLV3-16A0A075B6K0 115 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 LOC285095A0A1B0GVY8 99 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TCRBV9S1A1TA0A576 114 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM129A0AVI4 362 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NPIPB11E5RHQ5 1161 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 F5H768 121 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CDC7O00311 574 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 COPEO14579 308 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 DSCR3O14972 297 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FADS1O60427 444 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 VAPBO95292 243 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 P04436 131 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ARG1P05089 322 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 C2P06681 752 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ETFAP13804 333 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MUC1P15941 1255 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FAHP16930 419 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CD33P20138 364 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ACADLP28330 430 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CD200P41217 278 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NUDT2P50583 147 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 HLCSP50747 726 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FOXL2P58012 376 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CD81P60033 236 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RPL32P62910 135 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OC90Q02509 493 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CRYZQ08257 329 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CD47Q08722 323 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZP4Q12836 540 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RNPS1Q15287 305 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR8G1Q15617 311 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 VAMP3Q15836 100 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZBED5Q49AG3 693 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 LIN52Q52LA3 116 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NCBP2-AS2Q69YL0 99 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM225Q6GV28 225 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FAM45BPQ6NSW5 357 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PWWP2BQ6NUJ5 590 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 UGT3A1Q6NUS8 523 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PLXDC2Q6UX71 529 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RPTNQ6XPR3 784 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 QSOX2Q6ZRP7 698 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CREB3L2Q70SY1 520 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CENPUQ71F23 418 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NOXA1Q86UR1 476 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 KCNMB4Q86W47 210 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 IFNEQ86WN2 208 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CENPSQ8N2Z9 138 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ATPAF2Q8N5M1 289 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM251Q8N6I4 163 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CLDN22Q8N7P3 220 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 OR2AE1Q8NHA4 323 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CD200R1Q8TD46 325 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 GPR151Q8TDV0 419 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 TM9SF4Q92544 642 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 RERGQ96A58 199 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PELI1Q96FA3 418 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZBED6CLQ96FA7 236 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CELF6Q96J87 481 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF582Q96NG8 517 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ECSITQ9BQ95 431 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 AIF1LQ9BQI0 150 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 NDUFAF3Q9BU61 184 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MED18Q9BUE0 208 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 GGACTQ9BVM4 153 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ILKAPQ9H0C8 392 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MMP28Q9H239 520 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 KIR3DX1Q9H7L2 352 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 EML4Q9HC35 981 aaKnown RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 WFDC1Q9HC57 220 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 DNAJC4Q9NNZ3 241 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ISYNA1Q9NPH2 558 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF71Q9NQZ8 489 aaPredicted RBP2.4□□□□□ -2.03
PRPF39-206ENST00000554429 SLC22A11Q9NSA0 550 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 CUTCQ9NTM9 273 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PIPOXQ9P0Z9 390 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 FBLN5Q9UBX5 448 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 PCYOX1Q9UHG3 505 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 KCNIP3Q9Y2W7 256 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 V9GYY9 64 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 MGAQ8IWI9 3026 aa2.4□□□□□ -2.03
PRPF39-206ENST00000554429 USP9YO00507 2555 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 A0A087X0K7 114 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 IGHV5-51A0A0C4DH38 117 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 H3BNH8 94 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 KCNK1O00180 336 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ARPC1BO15143 372 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SOX15O60248 233 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RP2O75695 350 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 KLF7O75840 302 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TIAF1O95411 115 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TSPAN13O95857 204 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 JUNP05412 331 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 HOXD4P09016 255 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FOLR1P15328 257 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 S100GP29377 79 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms