RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 TCEAL3Q969E4 200 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 RASD2Q96D21 266 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 AURKBQ96GD4 344 aaPredicted RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 CCDC77Q9BR77 488 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 CENPKQ9BS16 269 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 FGF20Q9NP95 211 aaPredicted RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 NUFIP1Q9UHK0 495 aaKnown RBP3.29□□□□□ -1.88
CHD8-207ENST00000554384 NUP50Q9UKX7 468 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 N6AMT1Q9Y5N5 214 aa3.29□□□□□ -1.88
CHD8-207ENST00000554384 IGHV3-64DA0A0J9YX35 117 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 PRSS37A4D1T9 235 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 SMCO2A6NFE2 343 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 CCDC169A6NNP5 214 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 PES1O00541 588 aaKnown RBP3.28□□□□□ -1.88
CHD8-207ENST00000554384 PEX7O00628 323 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 EIF3GO75821 320 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD8-207ENST00000554384 TFPI2P48307 235 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 CCR8P51685 355 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 ZNF136P52737 540 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 TGM3Q08188 693 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 XKR7Q5GH72 579 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 PIGGQ5H8A4 983 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 C6orf120Q7Z4R8 191 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 EID2Q8N6I1 236 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 DEFB124Q8NES8 71 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 MARCH1Q8TCQ1 289 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 ACTRT1Q8TDG2 376 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 GIMAP1Q8WWP7 306 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 STMN2Q93045 179 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 SLC29A1Q99808 456 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 NEUROG2Q9H2A3 272 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 RPF2Q9H7B2 306 aaKnown RBP3.28□□□□□ -1.88
CHD8-207ENST00000554384 CTPS2Q9NRF8 586 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 ZNF226Q9NYT6 803 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 STOX2Q9P2F5 926 aaPredicted RBP3.28□□□□□ -1.88
CHD8-207ENST00000554384 MRPS18BQ9Y676 258 aaKnown RBP3.28□□□□□ -1.88
CHD8-207ENST00000554384 FBN3Q75N90 2809 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 ATAD5Q96QE3 1844 aa3.28□□□□□ -1.88
CHD8-207ENST00000554384 CELSR3Q9NYQ7 3312 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 NFASCO94856 1347 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 LAMA5O15230 3695 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 SPAARA0A1B0GVQ0 90 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 NKX2-6A6NCS4 301 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 ANKRD63C9JTQ0 380 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 KMOO15229 486 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 EIF3HO15372 352 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD8-207ENST00000554384 SOX15O60248 233 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 UTS2O95399 124 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 RPS2P15880 293 aaKnown RBP3.27□□□□□ -1.89
CHD8-207ENST00000554384 HOXA9P31269 272 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 CCNHP51946 323 aaPredicted RBP3.27□□□□□ -1.89
CHD8-207ENST00000554384 CDH6P55285 790 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 YWHAGP61981 247 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD8-207ENST00000554384 DYNLL1P63167 89 aaKnown RBP3.27□□□□□ -1.89
CHD8-207ENST00000554384 ZSCAN26Q16670 478 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 VPS26BQ4G0F5 336 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 SOHLH1Q5JUK2 328 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 VAX1Q5SQQ9 334 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 ARMC12Q5T9G4 340 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 SLC8B1Q6J4K2 584 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 ANKRD26P1Q6NSI1 321 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 Q6P435 159 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 TIFABQ6ZNK6 161 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 MMAAQ8IVH4 418 aaKnown RBP3.27□□□□□ -1.89
CHD8-207ENST00000554384 ASB9Q96DX5 294 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 CEP170P1Q96L14 293 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 TRIM4Q9C037 500 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 RBAKQ9NYW8 714 aaPredicted RBP3.27□□□□□ -1.89
CHD8-207ENST00000554384 PTTG3PQ9NZH4 202 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 Q9Y3F1 56 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 FBN2P35556 2912 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 ARHGAP21Q5T5U3 1957 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 TICRRQ7Z2Z1 1910 aa3.27□□□□□ -1.89
CHD8-207ENST00000554384 C2CD3Q4AC94 2353 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 TANC1Q9C0D5 1861 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 CTAGE15A4D2H0 777 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 SPECC1L-ADORA2AF8WAN1 911 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 H3BNH8 94 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 RAB29O14966 203 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 LSM1O15116 133 aaKnown RBP3.26□□□□□ -1.89
CHD8-207ENST00000554384 ZNF806P0C7X5 589 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 ZNF250P15622 560 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 NSG1P42857 185 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 UCNP55089 124 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
CHD8-207ENST00000554384 SMARCB1Q12824 385 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 ECH1Q13011 328 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 ARHGAP19Q14CB8 494 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 PPP1R7Q15435 360 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 SPECC1LQ69YQ0 1117 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 DNAJC24Q6P3W2 148 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 CTAGE6Q86UF2 777 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 ENTHD1Q8IYW4 607 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 CEP112Q8N8E3 955 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 ZFP41Q8N8Y5 198 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 FBXL13Q8NEE6 735 aa3.26□□□□□ -1.89
CHD8-207ENST00000554384 DUSP18Q8NEJ0 188 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms