RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 GFOD2Q3B7J2 385 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 ASB18Q6ZVZ8 466 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 OR13C3Q8NGS6 347 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 PDCD5O14737 125 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 TFECO14948 347 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 DHHO43323 396 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 HPNP05981 417 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 ACSM4P0C7M7 580 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 PPIAP62937 165 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 SCN1BQ07699 218 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 MINDY2Q8NBR6 621 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 HAVCR2Q8TDQ0 301 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 WACQ9BTA9 647 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 PBOV1Q9GZY1 135 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 TBCCD1Q9NVR7 557 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 SPATA2Q9UM82 520 aa11.24□□□□□ -0.61
VIPAS39-206ENST00000553888 EEF1E1O43324 174 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 PRKACAP17612 351 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 CD82P27701 267 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 HSD11B1P28845 292 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 TALDO1P37837 337 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 PITPNBP48739 271 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 SRP9P49458 86 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 CDC20Q12834 499 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 TAF13Q15543 124 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ABLIM2Q6H8Q1 611 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 C20orf196Q8IYI0 205 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 NEURL2Q9BR09 285 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 SLITRK2Q9H156 845 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 DSPP15924 2871 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ARHGAP21Q5T5U3 1957 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF878C9JN71 531 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ITGA5P08648 1049 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF121P58317 390 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 DGCR2P98153 550 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 SPOCK1Q08629 439 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 C10orf128Q5T292 105 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 KLHL24Q6TFL4 600 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 OR51E1Q8TCB6 317 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 FBXO17Q96EF6 278 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 HDHD2Q9H0R4 259 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 MYEF2Q9P2K5 600 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
VIPAS39-206ENST00000553888 GLSO94925 669 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 DBHP09172 617 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 CD3GP09693 182 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 CSRP1P21291 193 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 MSR1P21757 451 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 METAP1DQ6UB28 335 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 FNDC9Q8TBE3 224 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 NELFAQ9H3P2 528 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 AUNIPQ9H7T9 357 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 HHLA2Q9UM44 414 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 APOA1P02647 267 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 CEACAM1P13688 526 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 B4GALT1P15291 398 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 MMP16P51512 607 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 EFNB2P52799 333 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 KCNMB1Q16558 191 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 HYAL4Q2M3T9 481 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 C9orf135Q5VTT2 229 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 ZNF57Q68EA5 555 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 OR51D1Q8NGF3 324 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 OR8B12Q8NGG6 310 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 SYNPRQ8TBG9 265 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 FGGYQ96C11 551 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 ADAT3Q96EY9 351 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 KCNJ15Q99712 375 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 GAL3ST1Q99999 423 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 SF3B5Q9BWJ5 86 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 DCDC2BA2VCK2 349 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 TSPAN9O75954 239 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 KIR2DL3P43628 341 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 CX3CR1P49238 355 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 ASAH1Q13510 395 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 DEGS2Q6QHC5 323 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 FAM57BQ71RH2 274 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 COMMD2Q86X83 199 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 C19orf18Q8NEA5 215 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 SCPEP1Q9HB40 452 aa11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 KLF13Q9Y2Y9 288 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-206ENST00000553888 F5H5K5 113 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms