RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SERPINF1P36955 418 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 RAB13P51153 203 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 PNLIPRP3Q17RR3 467 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 H3F3CQ6NXT2 135 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 DCXRQ7Z4W1 244 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 PAQR4Q8N4S7 273 aaPredicted RBP15.68■□□□□ 0.1
SYNE3-202ENST00000553340 DTWD2Q8NBA8 298 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 ADIPOR1Q96A54 375 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 CDC6Q99741 560 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 TBL1XR1Q9BZK7 514 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 NMES1Q9C002 83 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 TRBV6-7A0A0A0MS04 114 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 DBX1A6NMT0 343 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 P2RY10O00398 339 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 PLPP3O14495 311 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 SNAPINO95295 136 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 WISP1O95388 367 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 CX3CR1P49238 355 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 POLR2HP52434 150 aaKnown RBP15.68■□□□□ 0.1
SYNE3-202ENST00000553340 TAS2R31P59538 309 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 DCDP81605 110 aaKnown RBP15.68■□□□□ 0.1
SYNE3-202ENST00000553340 ZP2Q05996 745 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 MICBQ29980 383 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 NKAPLQ5M9Q1 402 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 C1orf140Q5VVS0 124 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 SELENOIQ9C0D9 397 aa15.68■□□□□ 0.1
SYNE3-202ENST00000553340 KIAA0100Q14667 2235 aaKnown RBP15.68■□□□□ 0.1
SYNE3-202ENST00000553340 CDC14CA4D256 554 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 A8MVM7 634 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 B4DGG1 531 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 NPIPB7O75200 414 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 SCGNO76038 276 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 UNC119Q13432 240 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 PGAP1Q75T13 922 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-202ENST00000553340 FGGYQ96C11 551 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 A0A0B4J2A0 478 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 OR6C76A6NM76 312 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 H0YIG0 161 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 HSD11B1P28845 292 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 GNALP38405 381 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 PLEKHN1Q494U1 663 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-202ENST00000553340 SLC26A10Q8NG04 563 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 TMED6Q8WW62 240 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 WNT2BQ93097 391 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 NRSN2Q9GZP1 204 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 TLNRD1Q9H1K6 362 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 ZNF768Q9H5H4 540 aaKnown RBP15.67■□□□□ 0.1
SYNE3-202ENST00000553340 TREM1Q9NP99 234 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 MMP26Q9NRE1 261 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 SHPKQ9UHJ6 478 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 ATPIF1Q9UII2 106 aa15.67■□□□□ 0.1
SYNE3-202ENST00000553340 ARID1BQ8NFD5 2236 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-202ENST00000553340 A0A1W2PQD3 144 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 TMEM150CB9EJG8 249 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 ALG1L2C9J202 215 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 BPNT1O95861 308 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 GNB3P16520 340 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 RFC3P40938 356 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 SLC26A5P58743 744 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 SRSF3P84103 164 aaKnown RBP15.66■□□□□ 0.1
SYNE3-202ENST00000553340 DEGS2Q6QHC5 323 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 LINC00346Q8IVM7 164 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 SLC22A24Q8N4F4 322 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 ZNF248Q8NDW4 579 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 MARCH1Q8TCQ1 289 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 ST7LQ8TDW4 575 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 BIN3Q9NQY0 253 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 PRAMEF26H0Y7S4 382 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 AHSA1O95433 338 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 PMP2P02689 132 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 VSIG8P0DPA2 414 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 B2MP61769 119 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 DNM1P34Q6PK57 102 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 OR52N4Q8NGI2 321 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 ELP5Q8TE02 316 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 RELTQ969Z4 430 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 ZNF285Q96NJ3 590 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 C12orf57Q99622 126 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 RNF126Q9BV68 326 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 FN3KRPQ9HA64 309 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 LANCL2Q9NS86 450 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 CENPMQ9NSP4 180 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 TMEM131Q92545 1883 aa15.66■□□□□ 0.1
SYNE3-202ENST00000553340 SOX1O00570 391 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-202ENST00000553340 IGKV3-11P04433 115 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 H2BFMP0C1H6 154 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 CTHP32929 405 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 GSK3AP49840 483 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 DCAF7P61962 342 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 QRFPP83859 136 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 HLA-DQA1Q5Y7H0 255 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 HOGA1Q86XE5 327 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 UQCC2Q9BRT2 126 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 SEC11CQ9BY50 192 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 CYTL1Q9NRR1 136 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 LOC101059948A0A1B0GTJ6 334 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 SEMA4FO95754 770 aa15.65■□□□□ 0.1
SYNE3-202ENST00000553340 NR0B1P51843 470 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms