RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KRCC1Q9NPI7 259 aaPredicted RBP10.25□□□□□ -0.77
DDX54-206ENST00000549271 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
DDX54-206ENST00000549271 COA3Q9Y2R0 106 aaPredicted RBP10.25□□□□□ -0.77
DDX54-206ENST00000549271 POLR3KQ9Y2Y1 108 aaPredicted RBP10.25□□□□□ -0.77
DDX54-206ENST00000549271 LYVE1Q9Y5Y7 322 aa10.25□□□□□ -0.77
DDX54-206ENST00000549271 SLC22A31A6NKX4 558 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 C12orf71A8MTZ7 269 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 DCTN6O00399 190 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 ARPC3O15145 178 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 OR10H3O60404 316 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 KHDRBS3O75525 346 aaKnown RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 FOXH1O75593 365 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 KRT36O76013 467 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 PPP1R3DO95685 299 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 TSPAN15O95858 294 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 RPS6KA3P51812 740 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 RAG2P55895 527 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 PPP1CBP62140 327 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 DBPQ10586 325 aaPredicted RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 CDK5R2Q13319 367 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 MTX3Q5HYI7 312 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 SPATA46Q5T0L3 261 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 ZNF770Q6IQ21 691 aaPredicted RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 RFPL4BQ6ZWI9 263 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 ADCK1Q86TW2 530 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 DHFR2Q86XF0 187 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 OR4F5Q8NH21 305 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 GNPDA2Q8TDQ7 276 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 CLPTM1LQ96KA5 538 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 SAMD8Q96LT4 415 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 TSSK2Q96PF2 358 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 ERMAPQ96PL5 475 aaPredicted RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 BTBD10Q9BSF8 475 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 C1orf21Q9H246 121 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 ELOVL3Q9HB03 270 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 MMP26Q9NRE1 261 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 VNN3Q9NY84 501 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 PURGQ9UJV8 347 aaKnown RBP10.24□□□□□ -0.77
DDX54-206ENST00000549271 TMCC3Q9ULS5 477 aa10.24□□□□□ -0.77
DDX54-206ENST00000549271 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 TNFRSF11BO00300 401 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 GPANK1O95872 356 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 NGFP01138 241 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 IGHV2-70P01814 119 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 COX5BP10606 129 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 HIST1H1CP16403 213 aaKnown RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 ARHGDIAP52565 204 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 LSM6P62312 80 aaKnown RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 RELBQ01201 579 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 PPP1R8Q12972 351 aaKnown RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 KCNMB1Q16558 191 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 TAF9Q16594 264 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 TMEM155Q4W5P6 130 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 ARL9Q6T311 187 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 C9orf139Q6ZV77 190 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 GLB1L2Q8IW92 636 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 OR6V1Q8N148 313 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 ST7LQ8TDW4 575 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 C4orf45Q96LM5 186 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 DDOQ99489 341 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 TRIM15Q9C019 465 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 MS4A7Q9GZW8 240 aaPredicted RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 RERGLQ9H628 205 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 MAGIXQ9H6Y5 334 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 TBCCD1Q9NVR7 557 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 NDRG4Q9ULP0 352 aaKnown RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 PRPF19Q9UMS4 504 aaKnown RBP10.23□□□□□ -0.77
DDX54-206ENST00000549271 B9D1Q9UPM9 204 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 NPTNQ9Y639 398 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 AUP1Q9Y679 476 aa10.23□□□□□ -0.77
DDX54-206ENST00000549271 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 CLPSL1A2RUU4 121 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 FAM181BA6NEQ2 426 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 ACOT8O14734 319 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 SGCEO43556 437 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 IDH3BO43837 385 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 NDUFA7O95182 113 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 GASTP01350 101 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 SELEP16581 610 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 ZNF12P17014 697 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 SLC6A6P31641 620 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 RBMXP38159 391 aaKnown RBP10.22□□□□□ -0.77
DDX54-206ENST00000549271 IFNGR2P38484 337 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 MTNR1AP48039 350 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 PSG7Q13046 419 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 ZNF154Q13106 437 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 HLXQ14774 488 aaPredicted RBP10.22□□□□□ -0.77
DDX54-206ENST00000549271 CCDC92Q53HC0 331 aaPredicted RBP10.22□□□□□ -0.77
DDX54-206ENST00000549271 ZNF620Q6ZNG0 422 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 TRPM8Q7Z2W7 1104 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
DDX54-206ENST00000549271 NPEPL1Q8NDH3 523 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms