RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SURF4O15260 269 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 SNX3O60493 162 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 FOXH1O75593 365 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 ZNF205O95201 554 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 TXNDC12O95881 172 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 RENP00797 406 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 IGHV2-70P01814 119 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 RAC2P15153 192 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 HIST1H1CP16403 213 aaKnown RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 GATA3P23771 443 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 SLC6A6P31641 620 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 IFNGR2P38484 337 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 ACTG1P63261 375 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 MXRA7P84157 204 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 KCNMB1Q16558 191 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 SAMD4BQ5PRF9 694 aaKnown RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 C1QL2Q7Z5L3 287 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 NAA40Q86UY6 237 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 LRRC28Q86X40 367 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 LINC00346Q8IVM7 164 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 SPICQ8N5J4 248 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 BHLHE23Q8NDY6 225 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OR10AD1Q8NGE0 317 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OR52E2Q8NGJ4 325 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OR2AJ1Q8NGZ0 328 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OR13G1Q8NGZ3 307 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 ZNF420Q8TAQ5 688 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 FANK1Q8TC84 345 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 GNPDA2Q8TDQ7 276 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 GCDHQ92947 438 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 APOBEC3DQ96AK3 386 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 DHRS1Q96LJ7 313 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 NSMCE2Q96MF7 247 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 COG8Q96MW5 612 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 ZNF582Q96NG8 517 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 PITX2Q99697 317 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 SLC6A7Q99884 636 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 FUZQ9BT04 418 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OR52D1Q9H346 318 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 FN3KQ9H479 309 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 RPRD1BQ9NQG5 326 aaKnown RBP5.65□□□□□ -1.5
SCAF11-211ENST00000547950 MMP26Q9NRE1 261 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 ARL8BQ9NVJ2 186 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 CD300AQ9UGN4 299 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 IL19Q9UHD0 177 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 OPN4Q9UHM6 478 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 MAGEL2Q9UJ55 1249 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 LHFPL6Q9Y693 200 aa5.65□□□□□ -1.5
SCAF11-211ENST00000547950 IGLV1-36A0A0B4J1U3 117 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 OR6C68A6NDL8 312 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 TRAPPC2LH3BP13 241 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 TMEM178BH3BS89 294 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 TRIM77I1YAP6 450 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ARPC2O15144 300 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ARPC3O15145 178 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ATP8B1O43520 1251 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 CYB5R3P00387 301 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-211ENST00000547950 LCATP04180 440 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SEMG1P04279 462 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 HLA-DPB1P04440 258 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 FABP3P05413 133 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 HSD17B1P14061 328 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF823P16415 610 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 FPR3P25089 353 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 FPR2P25090 351 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 RRM2P31350 389 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SLC6A9P48067 706 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SRP9P49458 86 aaKnown RBP5.64□□□□□ -1.51
SCAF11-211ENST00000547950 RGS6P49758 472 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 HILS1P60008 231 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SEC61A1P61619 476 aaKnown RBP5.64□□□□□ -1.51
SCAF11-211ENST00000547950 BTG1P62324 171 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 GNGT1P63211 74 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ZMYND11Q15326 602 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 RSPO1Q2MKA7 263 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SLC36A3Q495N2 470 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 CLEC12AQ5QGZ9 265 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SLC27A4Q6P1M0 643 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 PGM2L1Q6PCE3 622 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 CYP2R1Q6VVX0 501 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 FBXW12Q6X9E4 464 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 CFAP77Q6ZQR2 320 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 MOGAT3Q86VF5 341 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ZDHHC21Q8IVQ6 265 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 DEFB107AQ8IZN7 70 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 PGAM4Q8N0Y7 254 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 BPIFB2Q8N4F0 458 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF283Q8N7M2 679 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 C3orf56Q8N813 242 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SDR9C7Q8NEX9 313 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SEMA6DQ8NFY4 1073 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 OR8G5Q8NG78 346 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 ZFAND2BQ8WV99 257 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SLCO4A1Q96BD0 722 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 JMJD8Q96S16 334 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 COQ7Q99807 217 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 SUCNR1Q9BXA5 334 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 HCAR1Q9BXC0 346 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 HDHD2Q9H0R4 259 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 MRPL18Q9H0U6 180 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms