RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MED12LQ86YW9 2145 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 IGHV3-64DA0A0J9YX35 117 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 SMLR1H3BR10 107 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 K7EM74 188 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 GPR171O14626 319 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 SYT7O43581 403 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 GPRIN2O60269 458 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 ZNF254O75437 659 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 PMS2P2O95744 297 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 CX3CR1P49238 355 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 GFRA1P56159 465 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 EIF3IQ13347 325 aaKnown RBP10.54□□□□□ -0.72
CCDC38-202ENST00000546386 TSC22D1Q15714 1073 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 CEACAM16Q2WEN9 425 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 SLC25A47Q6Q0C1 308 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 KCTD20Q7Z5Y7 419 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 ZNF554Q86TJ5 538 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 LRRC28Q86X40 367 aaPredicted RBP10.54□□□□□ -0.72
CCDC38-202ENST00000546386 OR8B12Q8NGG6 310 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 ENKURQ8TC29 256 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 RNF133Q8WVZ7 376 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 DVL3Q92997 716 aaPredicted RBP10.54□□□□□ -0.72
CCDC38-202ENST00000546386 MRPL48Q96GC5 212 aaKnown RBP10.54□□□□□ -0.72
CCDC38-202ENST00000546386 ZNF552Q9H707 407 aaPredicted RBP10.54□□□□□ -0.72
CCDC38-202ENST00000546386 KLHL9Q9P2J3 617 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 FLVCR2Q9UPI3 526 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 TRAPPC4Q9Y296 219 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 R4GMQ9 66 aa10.54□□□□□ -0.72
CCDC38-202ENST00000546386 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TRAV1-2A0A0B4J238 106 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 AIPO00170 330 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 SP1P08047 785 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 NPR2P20594 1047 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 NR4A2P43354 598 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 POU3F4P49335 361 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 RAC3P60763 192 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 CSNK2A1P68400 391 aaPredicted RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 ROM1Q03395 351 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 SNAI3Q3KNW1 292 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 MOGAT2Q3SYC2 334 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TPRA1Q86W33 373 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 OR4D6Q8NGJ1 314 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 OR52I2Q8NH67 350 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 UPRTQ96BW1 309 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 MCUBQ9NWR8 336 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 FAM206AQ9NX38 181 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 NUFIP1Q9UHK0 495 aaKnown RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 PCDHGA1Q9Y5H4 931 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TRBV5-5A0A0J9YX44 114 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 EFSO43281 561 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 DHHO43323 396 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 LYRM1O43325 122 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TGM6O95932 706 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 HGFACQ04756 655 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 TRAM1Q15629 374 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 RSPO1Q2MKA7 263 aaPredicted RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 C11orf91Q3C1V1 193 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 SIAH3Q8IW03 269 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 DND1Q8IYX4 353 aaKnown RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 OR1J2Q8NGS2 313 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 OR2V1Q8NHB1 315 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 FAM173AQ9BQD7 235 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 C1QTNF6Q9BXI9 259 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 SLITRK2Q9H156 845 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 SPATA2Q9UM82 520 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 BOKQ9UMX3 212 aaPredicted RBP10.53□□□□□ -0.72
CCDC38-202ENST00000546386 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
CCDC38-202ENST00000546386 LOC100509620A0A075B734 347 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ANKRD33BA6NCL7 494 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 SRSF10O75494 262 aaKnown RBP10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF432O94892 652 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 CSN2P05814 226 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 GIFP27352 417 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 SOX8P57073 446 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 CD83Q01151 205 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ENDOGQ14249 297 aaKnown RBP10.52□□□□□ -0.73
CCDC38-202ENST00000546386 GPR176Q14439 515 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM69Q5SWH9 247 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 TMEM123Q8N131 208 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 INTS1Q8N201 2190 aaKnown RBP10.52□□□□□ -0.73
CCDC38-202ENST00000546386 OR10K1Q8NGX5 313 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ASB17Q8WXJ9 295 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 SOSTQ9BQB4 213 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 PNRC2Q9NPJ4 139 aaKnown RBP10.52□□□□□ -0.73
CCDC38-202ENST00000546386 PCDHGA9Q9Y5G4 932 aaKnown RBP10.52□□□□□ -0.73
CCDC38-202ENST00000546386 CSMD1Q96PZ7 3565 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 ZNF716A6NP11 495 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 GMDSO60547 372 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 HLA-HP01893 362 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 FAHP16930 419 aa10.52□□□□□ -0.73
CCDC38-202ENST00000546386 DCTDP32321 178 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms