RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ADGRG7Q96K78 797 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 WDR92Q96MX6 357 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 GPR22Q99680 433 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 PIGMQ9H3S5 423 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 MBNL3Q9NUK0 354 aaKnown RBP8.01□□□□□ -1.13
VPS13D-212ENST00000543766 LAMP3Q9UQV4 416 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 CDH10Q9Y6N8 788 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 DOCK1Q14185 1865 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 ANTXRLA6NF34 631 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 LIPT2A6NK58 231 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 SGK494L7N484 410 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 FAAHO00519 579 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 RBFOX2O43251 390 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS13D-212ENST00000543766 LRP3O75074 770 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 TTRP02766 147 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
VPS13D-212ENST00000543766 SLC35E2BP0CK96 405 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 TAS2R43P59537 309 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 GAGE5Q13069 117 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 GAGE6Q13070 117 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 PTGES3Q15185 160 aaKnown RBP8.01□□□□□ -1.13
VPS13D-212ENST00000543766 SYTL3Q4VX76 610 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 GSG1LQ6UXU4 331 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 SLC44A3Q8N4M1 653 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 FADS6Q8N9I5 356 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 OR2Y1Q8NGV0 311 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 WBP2Q969T9 261 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 TIMP4Q99727 224 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 RHNO1Q9BSD3 238 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 RBFOX1Q9NWB1 397 aaKnown RBP8.01□□□□□ -1.13
VPS13D-212ENST00000543766 SLC2A8Q9NY64 477 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 KLHL13Q9P2N7 655 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 WDR45Q9Y484 360 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 NEUROG3Q9Y4Z2 214 aa8.01□□□□□ -1.13
VPS13D-212ENST00000543766 LOC100289279A0A1B0GTE1 492 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ANKRD30BLA7E2S9 258 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 M0R2Z0 102 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GNGT2O14610 69 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 HMGB3O15347 200 aaKnown RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 ABOP16442 354 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 OTX1P32242 354 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 ART1P52961 327 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 SSBP2P81877 361 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 KEAP1Q14145 624 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 MMDQ15546 238 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 PLPPR5Q32ZL2 321 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GLYR1Q49A26 553 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 SLC30A8Q8IWU4 369 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 NFKBIDQ8NI38 313 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GATAD1Q8WUU5 269 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 MRAP2Q96G30 205 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 TAAR6Q96RI8 345 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GABARAPL1Q9H0R8 117 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 JKAMPQ9P055 326 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 MIA3Q5JRA6 1907 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 C13orf42A0A1B0GVH6 325 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 SLC31A1O15431 190 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 UPK3AO75631 287 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 PGCP20142 388 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 HNRNPA3P51991 378 aaKnown RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 RBM11P57052 281 aaKnown RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 TBPL1P62380 186 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 SLC6A3Q01959 620 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 IQCJQ1A5X6 159 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 TRNP1Q6NT89 227 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 DLK2Q6UY11 383 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ISCA2Q86U28 154 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 OR13C4Q8NGS5 318 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 SMPDL3BQ92485 455 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ARL11Q969Q4 196 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 MRGPRX3Q96LB0 322 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 OR51J1Q9H342 316 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 MED9Q9NWA0 146 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 B4GALT7Q9UBV7 327 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 RNF6Q9Y252 685 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 LYRM1O43325 122 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 TNFSF14O43557 240 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 PCDH7O60245 1069 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF205O95201 554 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GLUD1P00367 558 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GKN3PP0CG01 181 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 CXCL3P19876 107 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 NFYAP23511 347 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 CHI3L1P36222 383 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 SLC7A9P82251 487 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 HIST1H1AQ02539 215 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 NKG7Q16617 165 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ENPP6Q6UWR7 440 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 TMEM179BQ7Z7N9 219 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 XYLT1Q86Y38 959 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 SYT12Q8IV01 421 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 OR9G4Q8NGQ1 327 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 FAM151AQ8WW52 585 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 TM4SF19Q96DZ7 209 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 GALNT14Q96FL9 552 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 ZNF419Q96HQ0 510 aaPredicted RBP8□□□□□ -1.13
VPS13D-212ENST00000543766 SLC46A2Q9BY10 475 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 S1PR5Q9H228 398 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 KCNK15Q9H427 330 aa8□□□□□ -1.13
VPS13D-212ENST00000543766 RNF167Q9H6Y7 350 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms