RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SPEF1Q9Y4P9 236 aa10.33□□□□□ -0.76
DDB1-223ENST00000543658 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
DDB1-223ENST00000543658 TMEM269A0A1B0GVZ9 245 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 IGLV1-44P01699 117 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 LCATP04180 440 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 DBHP09172 617 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 HSMCR30P0CW71 290 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 CCL2P13500 99 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 CRYGSP22914 178 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 MAP2K4P45985 399 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 NR1H2P55055 460 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 NAAAQ02083 359 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 SPHARQ15513 63 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 BCL2L15Q5TBC7 163 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 LIPNQ5VXI9 398 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 COMMD2Q86X83 199 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 KLBQ86Z14 1044 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 ZNF584Q8IVC4 421 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 SPARTQ8N0X7 666 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 FAM222BQ8WU58 562 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 GATAD2BQ8WXI9 593 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 SLC7A6Q92536 515 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 RORBQ92753 470 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 POM121L2Q96KW2 1035 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 C4orf45Q96LM5 186 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 COG8Q96MW5 612 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 ZNF75AQ96N20 296 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 SIGLEC11Q96RL6 698 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 COMMD4Q9H0A8 199 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 ISG20L2Q9H9L3 353 aaKnown RBP10.32□□□□□ -0.76
DDB1-223ENST00000543658 ACOT13Q9NPJ3 140 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 NPAP1Q9NZP6 1156 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 SCOCQ9UIL1 159 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 R4GMQ9 66 aa10.32□□□□□ -0.76
DDB1-223ENST00000543658 PRR14LQ5THK1 2151 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 LOC100509620A0A075B734 347 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 PRR32B1ATL7 298 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 THBDP07204 575 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 CD3EP07766 207 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 ADRA2AP08913 450 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 ACSM4P0C7M7 580 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 RNF224P0DH78 156 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 SLC2A1P11166 492 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 EPXP11678 715 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 CD40P25942 277 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 PSMB9P28065 219 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 PSMB10P40306 273 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 ZNF121P58317 390 aaPredicted RBP10.31□□□□□ -0.76
DDB1-223ENST00000543658 BDH1Q02338 343 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 EMX1Q04741 257 aaPredicted RBP10.31□□□□□ -0.76
DDB1-223ENST00000543658 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDB1-223ENST00000543658 MALLQ13021 153 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 IRF3Q14653 427 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 NEDD8Q15843 81 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 TIGD6Q17RP2 521 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 ZNF684Q5T5D7 378 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 SLC22A25Q6T423 547 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 KCTD8Q6ZWB6 473 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 FAM57BQ71RH2 274 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 MYPOPQ86VE0 399 aaPredicted RBP10.31□□□□□ -0.76
DDB1-223ENST00000543658 DMRTC2Q8IXT2 367 aaPredicted RBP10.31□□□□□ -0.76
DDB1-223ENST00000543658 OR5L1Q8NGL2 311 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 UFD1Q92890 307 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 APOBEC3DQ96AK3 386 aaPredicted RBP10.31□□□□□ -0.76
DDB1-223ENST00000543658 PELI1Q96FA3 418 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 PLPPR2Q96GM1 343 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 OR10A2Q9H208 303 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 OR51B6Q9H340 312 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 BABAM2Q9NXR7 383 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 CRIM1Q9NZV1 1036 aa10.31□□□□□ -0.76
DDB1-223ENST00000543658 IGHV2OR16-5A0A0B4J2B6 119 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 TRBV2A0A0J9YWF9 115 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 PNMA8CA0A1B0GUJ8 204 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.3□□□□□ -0.76
DDB1-223ENST00000543658 A1L4Q6 167 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 TRIM64A6NGJ6 449 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 ACOD1A6NK06 481 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 J3QW42 95 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 ABCD4O14678 606 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 XRCC2O43543 280 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 ATE1O95260 518 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 CLPTM1O96005 669 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 LCKP06239 509 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 OTX1P32242 354 aaPredicted RBP10.3□□□□□ -0.76
DDB1-223ENST00000543658 RAD52P43351 418 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 TGM4P49221 684 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 MMP16P51512 607 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 RPS23P62266 143 aaKnown RBP10.3□□□□□ -0.76
DDB1-223ENST00000543658 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 ALKBH1Q13686 389 aaKnown RBP10.3□□□□□ -0.76
DDB1-223ENST00000543658 GFOD2Q3B7J2 385 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 CCDC58Q4VC31 144 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 RPL22L1Q6P5R6 122 aaKnown RBP10.3□□□□□ -0.76
DDB1-223ENST00000543658 SEZ6L2Q6UXD5 910 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 OR52H1Q8NGJ2 320 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 ABHD4Q8TB40 342 aa10.3□□□□□ -0.76
DDB1-223ENST00000543658 PIK3IP1Q96FE7 263 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms