RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 IMPA2O14732 288 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 IER3P46695 156 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 LSM6P62312 80 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 CYBRD1Q53TN4 286 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 OR5L1Q8NGL2 311 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 TBC1D15Q8TC07 691 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 GATAD2BQ8WXI9 593 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 APOBEC3DQ96AK3 386 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 WDFY2Q96P53 400 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 SIRPDQ9H106 197 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 RHCGQ9UBD6 479 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 GRHPRQ9UBQ7 328 aa14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 COA3Q9Y2R0 106 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-214ENST00000542663 IGHV1-69DA0A0B4J2H0 117 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 EFCAB9A8MZ26 197 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FXYD1O00168 92 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 CDC42EP2O14613 210 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 AHCYL1O43865 530 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FAM20BO75063 409 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FCN3O75636 299 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 IGHV1-69P01742 117 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 CD14P08571 375 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FPR3P25089 353 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 SLC9A3P48764 834 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 NPY4RP50391 375 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 RAD23AP54725 363 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 RSPO1Q2MKA7 263 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 Q6ZSV7 163 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 LDLRAD3Q86YD5 345 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 ZSCAN4Q8NAM6 433 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FAM156AQ8NDB6 213 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 FAM110DQ8TAY7 271 aaPredicted RBP14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 STON2Q8WXE9 905 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 ZNF583Q96ND8 569 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 TECTBQ96PL2 329 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 SMURF1Q9HCE7 757 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 TMEM100Q9NV29 134 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 SNX13Q9Y5W8 968 aa14.74□□□□□ -0.05
CLSTN3-214ENST00000542663 A0A0U1RQK1 487 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 J3KTA2 159 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 XKRYO14609 159 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 RPL4P36578 427 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 YAP1P46937 504 aaKnown RBP14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 HIST1H3AP68431 136 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 MPPED2Q15777 294 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 HIST2H3PS2Q5TEC6 136 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 PRAMEF6Q5VXH4 476 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 HIST2H3AQ71DI3 136 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 GLB1L2Q8IW92 636 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 OFCC1Q8IZS5 231 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 CELF2-AS1Q8N7Q2 184 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 TPD52L3Q96J77 140 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 ZNF570Q96NI8 536 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 ECSITQ9BQ95 431 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 TRIM15Q9C019 465 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 SYT4Q9H2B2 425 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 KIF17Q9P2E2 1029 aa14.73□□□□□ -0.05
CLSTN3-214ENST00000542663 FFAR1O14842 300 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 SLC16A7O60669 478 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 IFNA14P01570 189 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 LIPFP07098 398 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 IRF2P14316 349 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 CD200P41217 278 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 GPR4P46093 362 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 CYLC2Q14093 348 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 KCNMB1Q16558 191 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 BEAN1Q3B7T3 259 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 LRRC23Q53EV4 343 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 CD276Q5ZPR3 534 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 TBPL2Q6SJ96 375 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 COLCA1Q6ZS62 124 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 OR8J3Q8NGG0 315 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 LHX4Q969G2 390 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 ERGIC1Q969X5 290 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 MMADHCQ9H3L0 296 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 RERGLQ9H628 205 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 C16orf95Q9H693 158 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 UFSP2Q9NUQ7 469 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 LHFPL6Q9Y693 200 aa14.72□□□□□ -0.05
CLSTN3-214ENST00000542663 A0A087WUU8 490 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 KHDRBS3O75525 346 aaKnown RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 KDELR2P33947 212 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 SELENOWP63302 87 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 KRR1Q13601 381 aaKnown RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 MEP1BQ16820 701 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 KRTAP27-1Q3LI81 207 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 ZBED5Q49AG3 693 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 METTL11BQ5VVY1 283 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 SFRP4Q6FHJ7 346 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 ERICH5Q6P6B1 374 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 TMPRSS11FQ6ZWK6 438 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 OR11L1Q8NGX0 322 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 COQ7Q99807 217 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 NMNAT1Q9HAN9 279 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 VSX1Q9NZR4 365 aaPredicted RBP14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 ERVK-18Q9QC07 812 aa14.71□□□□□ -0.05
CLSTN3-214ENST00000542663 G3V4G9 280 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms