RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 OR10G2Q8NGC3 310 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 OR6K2Q8NGY2 324 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 OR6N1Q8NGY5 312 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 GEMIN6Q8WXD5 167 aaKnown RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 RAB40AQ8WXH6 277 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 FAM3CQ92520 227 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 DYRK2Q92630 601 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 WDR89Q96FK6 387 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 SCLYQ96I15 445 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 HARBI1Q96MB7 349 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 MCEEQ96PE7 176 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 ABHD1Q96SE0 405 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 PTPN18Q99952 460 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 ALG12Q9BV10 488 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 VAMP8Q9BV40 100 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 DUSP23Q9BVJ7 150 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 CIPCQ9C0C6 399 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 TCEAL2Q9H3H9 227 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 C1orf198Q9H425 327 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 SRD5A3Q9H8P0 318 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 BEX1Q9HBH7 125 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 GPR35Q9HC97 309 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 CA10Q9NS85 328 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 SPANXCQ9NY87 97 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 LAMTOR2Q9Y2Q5 125 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 YBX2Q9Y2T7 364 aaKnown RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 STRAPQ9Y3F4 350 aaKnown RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 DNAJC15Q9Y5T4 150 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 URGCP-MRPS24S4R325 110 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 MTCL1Q9Y4B5 1905 aaKnown RBP4.69□□□□□ -1.66
SNHG1-218ENST00000541615 CAMTA1Q9Y6Y1 1673 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 PHIPQ8WWQ0 1821 aa4.69□□□□□ -1.66
SNHG1-218ENST00000541615 DLEC1Q9Y238 1755 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZFC3H1O60293 1989 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 A0A087WV62 115 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TRBV6-7A0A0A0MS04 114 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TCRBV5S1A1TA0A578 114 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ASPDHA6ND91 283 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF705FA8MVS1 300 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 MINDY4BA8MYZ0 360 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 C17orf105B2RV13 164 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SHISA8B8ZZ34 492 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 HAS3O00219 553 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TRAF3IP2O43734 574 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 LANCL1O43813 399 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 HYAL3O43820 417 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 PQBP1O60828 265 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SCGB2A1O75556 95 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TIAF1O95411 115 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 DUS4LO95620 317 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF682O95780 498 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 MT-ND4P03905 459 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TRGC2P03986 189 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CSTBP04080 98 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ATP1B1P05026 303 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ICAM1P05362 532 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SYPP08247 313 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 OR4Q2P0C623 313 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF705DP0CH99 300 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 ZNF705BP0CI00 300 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CD37P11049 281 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 AKR1C4P17516 323 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 OR1D2P34982 312 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CHI3L1P36222 383 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 MPLP40238 635 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 AQP2P41181 271 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 VIPR2P41587 438 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 KIR3DL1P43629 444 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RND2P52198 227 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 HMGA2P52926 109 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RABGGTBP53611 331 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CRISP3P54108 245 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 PNLIPRP1P54315 467 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 DIO3P55073 304 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 WNT3AP56704 352 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 H2BFSP57053 126 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 MLF1P58340 268 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SMIM11AP58511 58 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TAS2R43P59537 309 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 UBE2NP61088 152 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 OSTNP61366 133 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 WDR5P61964 334 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SNRPD1P62314 119 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SNRPNP63162 240 aaKnown RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 IRF9Q00978 393 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 BATFQ16520 125 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.68□□□□□ -1.662e-6■■■■■ 41.6
SNHG1-218ENST00000541615 MST1LQ2TV78 715 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TMEM41BQ5BJD5 291 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 UBE2NLQ5JXB2 153 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TPTE2P1Q5T6R2 138 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 DCAF15Q66K64 600 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 SLC27A1Q6PCB7 646 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TRAT1Q6PIZ9 186 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 TOMM20LQ6UXN7 152 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 Q6ZPB1 254 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-218ENST00000541615 CHST9Q7L1S5 443 aa4.68□□□□□ -1.66
SNHG1-218ENST00000541615 RTN4RL2Q86UN3 420 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms