RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 UPB1Q9UBR1 384 aa24.31■■□□□ 1.48
CCM2-218ENST00000541586 NCOA6Q14686 2063 aaPredicted RBP24.31■■□□□ 1.48
CCM2-218ENST00000541586 TMEM269A0A1B0GVZ9 245 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 IL18BPO95998 194 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 CST2P09228 141 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 PEX19P40855 299 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 STK11Q15831 433 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 ODF4Q2M2E3 257 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 UBE2J2Q8N2K1 259 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 ZNF610Q8N9Z0 462 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 ASB5Q8WWX0 329 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 BARHL1Q9BZE3 327 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 PLSCR4Q9NRQ2 329 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 MYO18BQ8IUG5 2567 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 FAM90A27PA6NNH2 459 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 LOC110117498-PIK3R3F6TDL0 507 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 CASKO14936 926 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 GATBO75879 557 aaKnown RBP24.3■■□□□ 1.48
CCM2-218ENST00000541586 MMP16P51512 607 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 CDSNQ15517 529 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 TAF13Q15543 124 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 ZNF829Q3KNS6 432 aaPredicted RBP24.3■■□□□ 1.48
CCM2-218ENST00000541586 ZNF404Q494X3 552 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 KLHL24Q6TFL4 600 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 PAMR1Q6UXH9 720 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 UNQ9370/PRO34162Q6UXP9 181 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 RDH10Q8IZV5 341 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 MCFD2Q8NI22 146 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 SLC25A46Q96AG3 418 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 G6PC2Q9NQR9 355 aa24.3■■□□□ 1.48
CCM2-218ENST00000541586 FREM1Q5H8C1 2179 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 HSD11B1P28845 292 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 RORCP51449 518 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 ZNF813Q6ZN06 617 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 RELL2Q8NC24 303 aaPredicted RBP24.29■■□□□ 1.48
CCM2-218ENST00000541586 NXF2Q9GZY0 626 aaKnown RBP24.29■■□□□ 1.48
CCM2-218ENST00000541586 DDX28Q9NUL7 540 aaKnown RBP24.29■■□□□ 1.48
CCM2-218ENST00000541586 FAM206AQ9NX38 181 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 PRSS50Q9UI38 385 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 OR52A1Q9UKL2 312 aa24.29■■□□□ 1.48
CCM2-218ENST00000541586 A0A1W2PPK0 400 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 CGAP01215 116 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 MAGEB1P43366 347 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 MTNR1BP49286 362 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 FOXG1P55316 489 aaPredicted RBP24.28■■□□□ 1.48
CCM2-218ENST00000541586 ARF1P84077 181 aaKnown RBP24.28■■□□□ 1.48
CCM2-218ENST00000541586 SRSF1Q07955 248 aaKnown RBP eCLIP24.28■■□□□ 1.48
CCM2-218ENST00000541586 FAPQ12884 760 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 NRN1LQ496H8 165 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 CCDC92Q53HC0 331 aaPredicted RBP24.28■■□□□ 1.48
CCM2-218ENST00000541586 C9orf135Q5VTT2 229 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 ITLN2Q8WWU7 325 aaPredicted RBP24.28■■□□□ 1.48
CCM2-218ENST00000541586 NIPAL2Q9H841 368 aa24.28■■□□□ 1.48
CCM2-218ENST00000541586 SMIM30A4D0T7 59 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 ZNF879B4DU55 563 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 UCHL1P09936 223 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 OR3A2P47893 321 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 XKRXQ6PP77 449 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 OR10AC1Q8NH08 325 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 LILRB4Q8NHJ6 448 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 A3GALT2U3KPV4 340 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 TRBV5-5A0A0J9YX44 114 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 GRB2P62993 217 aaKnown RBP24.27■■□□□ 1.48
CCM2-218ENST00000541586 HNRNPA0Q13151 305 aaKnown RBP24.27■■□□□ 1.48
CCM2-218ENST00000541586 Q499Y3 187 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 TFAP2EQ6VUC0 442 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 SKA3Q8IX90 412 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 PHYHIPQ92561 330 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 ATF6BQ99941 703 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 MMP27Q9H306 513 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 PIGMQ9H3S5 423 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 BRD7Q9NPI1 651 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 MALT1Q9UDY8 824 aa24.27■■□□□ 1.48
CCM2-218ENST00000541586 NKX2-6A6NCS4 301 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 ACOD1A6NK06 481 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 ARL6IP5O75915 188 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 MYL9P24844 172 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 PSMA6P60900 246 aaKnown RBP24.26■■□□□ 1.47
CCM2-218ENST00000541586 ELFN2Q5R3F8 820 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 SLC16A14Q7RTX9 510 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 OR51A4Q8NGJ6 313 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 GPR148Q8TDV2 347 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 DERL3Q96Q80 235 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 NOX4Q9NPH5 578 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 PLEK2Q9NYT0 353 aa24.26■■□□□ 1.47
CCM2-218ENST00000541586 FARS2O95363 451 aaKnown RBP24.25■■□□□ 1.47
CCM2-218ENST00000541586 OCM2P0CE71 109 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 PRKXP51817 358 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 CAV3P56539 151 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 BCL2L15Q5TBC7 163 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 FBXW9Q5XUX1 488 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 ZNF627Q7L945 461 aa24.25■■□□□ 1.47
CCM2-218ENST00000541586 ZNF808Q8N4W9 903 aaPredicted RBP24.25■■□□□ 1.47
CCM2-218ENST00000541586 A8MXE2 369 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 H3BSH0 61 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 MSTNO14793 375 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 PIN1P1O15428 100 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 PATE4P0C8F1 98 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 RNF224P0DH78 156 aa24.24■■□□□ 1.47
CCM2-218ENST00000541586 ZNF32P17041 273 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms