RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 HDHD2Q9H0R4 259 aa10.41□□□□□ -0.74
COPS7A-211ENST00000540408 MARCH7Q9H992 704 aa10.41□□□□□ -0.74
COPS7A-211ENST00000540408 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
COPS7A-211ENST00000540408 C1RLQ9NZP8 487 aa10.41□□□□□ -0.74
COPS7A-211ENST00000540408 ERVK-18Q9QC07 812 aa10.41□□□□□ -0.74
COPS7A-211ENST00000540408 COA3Q9Y2R0 106 aaPredicted RBP10.41□□□□□ -0.74
COPS7A-211ENST00000540408 ELOVL7A1L3X0 281 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 BBIP1A8MTZ0 92 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 FAM220BPB1ANY3 271 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 MRASO14807 208 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 RER1O15258 196 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 TOX4O94842 621 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 DBHP09172 617 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 GATA4P43694 442 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 RAD23AP54725 363 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 MAPRE2Q15555 327 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 MESTQ5EB52 335 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 PGM2L1Q6PCE3 622 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 DNM1P34Q6PK57 102 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 CELF2-AS1Q8N7Q2 184 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 SSMEM1Q8WWF3 244 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 GATAD2BQ8WXI9 593 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 DYRK2Q92630 601 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 TECTBQ96PL2 329 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 COQ7Q99807 217 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 TRIM15Q9C019 465 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 SYT4Q9H2B2 425 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 TMEM5Q9Y2B1 443 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 NOP16Q9Y3C1 178 aaKnown RBP10.4□□□□□ -0.74
COPS7A-211ENST00000540408 RNF114Q9Y508 228 aa10.4□□□□□ -0.74
COPS7A-211ENST00000540408 A0A087WUU8 490 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 ZNF879B4DU55 563 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 J3KTA2 159 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
COPS7A-211ENST00000540408 MLNRO43193 412 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 NDUFB2O95178 105 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 HLA-DPB1P04440 258 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 MELTFP08582 738 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 CRABP1P29762 137 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 SDHAP31040 664 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 GPR4P46093 362 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 MALLQ13021 153 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 KRR1Q13601 381 aaKnown RBP10.39□□□□□ -0.75
COPS7A-211ENST00000540408 FHL1Q13642 323 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 TAF9Q16594 264 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 FAM201AQ5SY85 155 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 METTL11BQ5VVY1 283 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 LYPD2Q6UXB3 125 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 FKBP9P1Q75LS8 142 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 FAM122BQ7Z309 247 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 ADCK1Q86TW2 530 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 CYP4Z1Q86W10 505 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 PNLDC1Q8NA58 520 aaKnown RBP10.39□□□□□ -0.75
COPS7A-211ENST00000540408 CDADC1Q9BWV3 514 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 SLC22A4Q9H015 551 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 MMADHCQ9H3L0 296 aaPredicted RBP10.39□□□□□ -0.75
COPS7A-211ENST00000540408 TRIM36Q9NQ86 728 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 ACOXLQ9NUZ1 547 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 AP3M1Q9Y2T2 418 aa10.39□□□□□ -0.75
COPS7A-211ENST00000540408 TGP01266 2768 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 FXYD1O00168 92 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 CDC42EP2O14613 210 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 NDUFA2O43678 99 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 ZNF682O95780 498 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 CFHR2P36980 270 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 PSMB10P40306 273 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 PMELP40967 661 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 RELBQ01201 579 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 KCNMB1Q16558 191 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 IFI44LQ53G44 452 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 OTPQ5XKR4 325 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 TBPL2Q6SJ96 375 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 ZNF841Q6ZN19 808 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.38□□□□□ -0.75
COPS7A-211ENST00000540408 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 Q8TCH9 128 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 SPRYD4Q8WW59 207 aaPredicted RBP10.38□□□□□ -0.75
COPS7A-211ENST00000540408 WDFY2Q96P53 400 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 PKP2Q99959 881 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 RBM4BQ9BQ04 359 aaKnown RBP10.38□□□□□ -0.75
COPS7A-211ENST00000540408 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 WDR76Q9H967 626 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 FN3KRPQ9HA64 309 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 TCF7L1Q9HCS4 588 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 UFSP2Q9NUQ7 469 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
COPS7A-211ENST00000540408 ARMCX1Q9P291 453 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 RNF7Q9UBF6 113 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 RPS6KA6Q9UK32 745 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
COPS7A-211ENST00000540408 DOCK11Q5JSL3 2073 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 CENPVL3A0A0U1RRI6 287 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 LOC100653049A0A140TA62 436 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 A0A1B0GWJ7 208 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 C22orf46C9J442 243 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 F5H5K5 113 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 SOCS2O14508 198 aa10.37□□□□□ -0.75
COPS7A-211ENST00000540408 FFAR1O14842 300 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms