RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZNF281Q9Y2X9 895 aa14.1□□□□□ -0.15
TRAF3-204ENST00000539721 TMEM212A6NML5 194 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 RGS9O75916 674 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ZFPL1O95159 310 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 DBHP09172 617 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 NCS1P62166 190 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 GSG1Q2KHT4 349 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 SOWAHCQ53LP3 525 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 GDPGP1Q6ZNW5 385 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 IL17RDQ8NFM7 739 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 PPP1R14AQ96A00 147 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 TRMT61AQ96FX7 289 aaKnown RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 CENPOQ9BU64 300 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 MOB1AQ9H8S9 216 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 N6AMT1Q9Y5N5 214 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 A8MXE2 369 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 M0R135 149 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 GABRPO00591 440 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 SERPINA3P01011 423 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 APOC1P02654 83 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ANXA2P07355 339 aaKnown RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 SLC2A1P11166 492 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 CRYGSP22914 178 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 IL32P24001 234 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 SLC6A9P48067 706 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 TPTEP56180 551 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF121P58317 390 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 PLP2Q04941 152 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 CD200R1LQ6Q8B3 271 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 MDP1Q86V88 176 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 LIX1LQ8IVB5 337 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 C17orf78Q8N4C9 275 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 RELL2Q8NC24 303 aaPredicted RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 OR13C5Q8NGS8 318 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ABHD4Q8TB40 342 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ZNF799Q96GE5 643 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 BOD1Q96IK1 185 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 DCLRE1CQ96SD1 692 aaKnown RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 PBOV1Q9GZY1 135 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 RNF167Q9H6Y7 350 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 SLC17A5Q9NRA2 495 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 TXNL4BQ9NX01 149 aaKnown RBP14.09□□□□□ -0.15
TRAF3-204ENST00000539721 B3GNT2Q9NY97 397 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ATPIF1Q9UII2 106 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 COL6A6A6NMZ7 2263 aa14.09□□□□□ -0.15
TRAF3-204ENST00000539721 ARPC4-TTLL3A0A0A6YYG9 625 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 IQCMA0A1B0GVH7 501 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 A0A1W2PR80 420 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 SLC22A1O15245 554 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 ATE1O95260 518 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 OTX1P32242 354 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-204ENST00000539721 TGFBR1P36897 503 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 INSL4Q14641 139 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 RSPO1Q2MKA7 263 aaPredicted RBP14.08□□□□□ -0.16
TRAF3-204ENST00000539721 CNPY1Q3B7I2 92 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 YIF1BQ5BJH7 314 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 C22orf42Q6IC83 251 aa14.08□□□□□ -0.16
TRAF3-204ENST00000539721 CPEB3Q8NE35 698 aaKnown RBP14.08□□□□□ -0.16
TRAF3-204ENST00000539721 NUFIP1Q9UHK0 495 aaKnown RBP14.08□□□□□ -0.16
TRAF3-204ENST00000539721 COX5BP10606 129 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 GALP22466 123 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 APEX1P27695 318 aaKnown RBP14.07□□□□□ -0.16
TRAF3-204ENST00000539721 SPCS2Q15005 226 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 STAC2Q6ZMT1 411 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 TMEM91Q6ZNR0 172 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 FAM57BQ71RH2 274 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 FJX1Q86VR8 437 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 ELMOD2Q8IZ81 293 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 RGP1Q92546 391 aaPredicted RBP14.07□□□□□ -0.16
TRAF3-204ENST00000539721 PGAM5Q96HS1 289 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 GSTK1Q9Y2Q3 226 aa14.07□□□□□ -0.16
TRAF3-204ENST00000539721 PSMB1P20618 241 aaKnown RBP14.06□□□□□ -0.16
TRAF3-204ENST00000539721 FGF9P31371 208 aaPredicted RBP14.06□□□□□ -0.16
TRAF3-204ENST00000539721 RPS11P62280 158 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF3-204ENST00000539721 KRTAP27-1Q3LI81 207 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 ACSM3Q53FZ2 586 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 DRAM2Q6UX65 266 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 ZNF704Q6ZNC4 412 aaPredicted RBP14.06□□□□□ -0.16
TRAF3-204ENST00000539721 CEACAM19Q7Z692 300 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 NAA40Q86UY6 237 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 RDH10Q8IZV5 341 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 WDR31Q8NA23 367 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 OR8B12Q8NGG6 310 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 NDNFQ8TB73 568 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 POLEQ07864 2286 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 IGSF10Q6WRI0 2623 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 ACOD1A6NK06 481 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 H3BSH0 61 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 TTRP02766 147 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 ACSM4P0C7M7 580 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 UBCP0CG48 685 aaKnown RBP14.06□□□□□ -0.16
TRAF3-204ENST00000539721 STOMP27105 288 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 APLNRP35414 380 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 TLE1Q04724 770 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 ZNF584Q8IVC4 421 aa14.06□□□□□ -0.16
TRAF3-204ENST00000539721 GALNT11Q8NCW6 608 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms