RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ZNF627Q7L945 461 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 P2RY8Q86VZ1 359 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LIX1LQ8IVB5 337 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MS4A15Q8N5U1 240 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TSEN15Q8WW01 171 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 HSD17B8Q92506 261 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 S100PBPQ96BU1 408 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF799Q96GE5 643 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZC3HAV1LQ96H79 300 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CCDC120Q96HB5 630 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OPALINQ96PE5 141 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SIGLEC11Q96RL6 698 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MED18Q9BUE0 208 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 WNT5BQ9H1J7 359 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR10A2Q9H208 303 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 NGBQ9NPG2 151 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 NDRG3Q9UGV2 375 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 BOD1L1Q8NFC6 3051 aa9.31□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TMEM212A6NML5 194 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 E9PI62 339 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 H3BSA7 217 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GPRIN2O60269 458 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 C1QL1O75973 258 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ABHD16AO95870 558 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 HLA-DPB1P04440 258 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SERPINA5P05154 406 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OCM2P0CE71 109 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OCMP0CE72 109 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 COX5BP10606 129 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLC2A1P11166 492 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PSKH1P11801 424 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CBR1P16152 277 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 COX5AP20674 150 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 DCTDP32321 178 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF83P51522 516 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF121P58317 390 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LSM3P62310 102 aaKnown RBP9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ACSM1Q08AH1 577 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TPBGQ13641 420 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TIMM23BQ5SRD1 257 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 XKRXQ6PP77 449 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 DRAM2Q6UX65 266 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PAMR1Q6UXH9 720 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 STAC2Q6ZMT1 411 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 WFDC8Q8IUA0 241 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PHC2Q8IXK0 858 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLC30A7Q8NEW0 376 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR5L1Q8NGL2 311 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR13F1Q8NGS4 319 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR2G2Q8NGZ5 317 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LILRB4Q8NHJ6 448 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLC7A6Q92536 515 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GHSRQ92847 366 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CHCHD6Q9BRQ6 235 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FUNDC2Q9BWH2 189 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FAM192AQ9GZU8 254 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PBOV1Q9GZY1 135 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SLITRK2Q9H156 845 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MOB1AQ9H8S9 216 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 STUB1Q9UNE7 303 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF281Q9Y2X9 895 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LSM2Q9Y333 95 aaKnown RBP9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SPEF1Q9Y4P9 236 aa9.3□□□□□ -0.92
TNFRSF1A-211ENST00000538363 FREM1Q5H8C1 2179 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ARPC4-TTLL3A0A0A6YYG9 625 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 NKX2-6A6NCS4 301 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ACOD1A6NK06 481 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 H3BSH0 61 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PYCARD-AS1I3L0S3 204 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OGG1O15527 345 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SYNGR3O43761 229 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RGS9O75916 674 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ATE1O95260 518 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MMP7P09237 267 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CCL2P13500 99 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PPP3CBP16298 524 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF20P17024 532 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PSMB1P20618 241 aaKnown RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 NR4A1P22736 598 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 MAPK3P27361 379 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 GABRA5P31644 462 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 UGT2B10P36537 528 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 LIPAP38571 399 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CCR9P51686 369 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 PSMA6P60900 246 aaKnown RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RPS25P62851 125 aaKnown RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 HIST1H3AP68431 136 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CDK5R1Q15078 307 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 ZNF684Q5T5D7 378 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 HIST2H3PS2Q5TEC6 136 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 HIST2H3AQ71DI3 136 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 CEACAM19Q7Z692 300 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 RELL2Q8NC24 303 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR52H1Q8NGJ2 320 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 OR10S1Q8NGN2 331 aa9.29□□□□□ -0.92
TNFRSF1A-211ENST00000538363 THRSPQ92748 146 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms